CF503956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK7_RAT (Cell division protein kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25 Identity = 69/160 (43.12%), Postives = 91/160 (56.88%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYW-KKSKLPHATLFK--PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 472 ++ GVLKLADFGLA S T +VVT WYR PELL GA YG VD+W+VGC+ AELL+ P L G ++++QL +IF+ G+P ++ W LP FK P P L+ F + LI+ L P R TAS AL ++YFS +P Sbjct: 137 LDENGVLKLADFGLAK-SFGSPNWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIP----LQHIFIAAGDDLLELIQGLFLFNPCTRITASQALRTKYFSNRP 291
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25 Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQP--YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 466 +N G +KLADFGLA R T VVTLWYR PE+LLG+ Y +VD+WS+GC+FAE++ K + G +E++QL +IF++ G+P +D W ++LP +K P L E +L +L+ LL +P +R TA ALA YFS+ Sbjct: 135 INELGAIKLADFGLARAFGVPLRT-YTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTWPGVTQLPD---YKGSFPKWTRKGLEEIVPNLEPEGRDLLMQLLQYDPSQRITAKTALAHPYFSS 288
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25 Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460 LKLADFGLA R T VVTLWYR PE+LLG+ Y VD+WSVGC+FAE+ +P+ G +E+++L KIF++ G+P +D W + LP P+ P L +L ++L+ ++L ++P KR TA +A+ EYF Sbjct: 139 LKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLSPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPRWP-SKDLATVVPNLEPAGLDLLNSMLCLDPTKRITARSAVEHEYF 284
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 64/155 (41.29%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY----DSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP 472 LK+AD GLA + T + T ++TLWYR PE+LLGAT Y +VD+WSVGC+FAEL+ + I QG +E++QL IFKL G+P ++ W P + K Y S+L +L V+L+ +L EP KR +A A+ YF P Sbjct: 160 LKIADLGLAR-AFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTNQAIFQGDSELQQLLHIFKLFGTPNEEMW-----PGVSTLKNWHEYPQWKPSTLSSAVPNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDLP 308
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDKD1_ARATH (Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 69/181 (38.12%), Postives = 95/181 (52.49%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYD----SSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAK 532 + G LKLADFGLA + R+ T +V WYR PELL GA Y +VD+W+ GC+FAELL+ +P LQG ++++QL KIF G+P D W P Y SLR + A++L+ + + +P R + AL YF++ P D LP P SK+ DAK Sbjct: 141 IGPNGQLKLADFGLARIFGSPGRK-FTHQVFARWYRAPELLFGAKQYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQW-----PDMICLPDYVEYQFVPAPSLRSLLPTVSEDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDPLKLP-RPVSKQ-DAK 313
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 66/149 (44.30%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLP-HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460 LKLADFGLA R T VVTLWYR PE+LLG+ Y VD+WSVGC+FAE++ KP+ G +E+++L KIF++ G+P + W S LP + + F Q D L L ++L+ +L EP KR TA AL EYF Sbjct: 142 LKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKSAFPKWQAQD--LATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYF 287
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 68/166 (40.96%), Postives = 92/166 (55.42%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF-----STKPYAC 481 ++N+GV+KLADFGLA R T VVTLWYR PE+LLG+ Y VD+WS G +FAEL KP+ G +E++QL +IF+ G+P +D W LP P+ SL K+L ++L+ +L P KR +A A+ YF ST P AC Sbjct: 136 IDNKGVIKLADFGLARAFGVPVRV-YTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWK-GGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLPAAC 299
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2A_ANTMA (Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460 LKLADFGLA R T VVTLWYR PE+LLG+ Y VD+WSVGC+FAE++ +P+ G +E+++L KIF++ G+P ++ W + LP P+ P L +L + ++L++ +L ++P KR TA AL EYF Sbjct: 142 LKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVMGTPNEETWPGVTSLPDFKSAFPKWP-AKELAAVVPNLDASGLDLLDKMLRLDPSKRITARNALQHEYF 287
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 61/155 (39.35%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 463 ++ EG LKLADFGLA R T VVTLWYR PE+LLG Y VD+WSVGC+FAE+ KP+ G +E++++ +IF++ G+P ++ W + LP PQ L E L ++L++ +L +P +R +A AL YF+ Sbjct: 141 IDKEGNLKLADFGLARAFGVPLRA-YTHEVVTLWYRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIWPDVNYLPDFKSSFPQWK-KKPLSEAVPSLDANGIDLLDQMLVYDPSRRISAKRALIHPYFN 293
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK7_CARAU (Cell division protein kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.075e-24 Identity = 77/193 (39.90%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFK--PQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHRED----ARRKR 559 ++ GVLKLADFGLA + +R T +VVT WYR PELL GA YG VD+W+VG + AELL+ P L G ++++QL IF+ G+P ++ W S LP FK P P + DL + L++ L + P R TAS AL YFS +P LP P S K +E+ +RKR Sbjct: 144 LDENGVLKLADFGLAKAFGSPNRV-YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGSILAELLLRVPFLAGDSDLDQLTGIFEALGTPTEETWPGMSNLPDYVSFKLFPGTPLEHIFSAAGDDL----LELLKGLFTFNPCTRTTASQALKMRYFSIRPGPTPGPQLP-RPNSSTEALKEKENLLIGIKRKR 330 The following BLAST results are available for this feature:
BLAST of CF503956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503956 ID=CF503956; Name=CF503956; organism=Citrus sinensis; type=EST; length=721bpback to top |