CF503956

Overview
NameCF503956
Unique NameCF503956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 65/156 (41.67%), Postives = 88/156 (56.41%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELL-IGKPILQGRTEVEQLHKIFKLCGSPPDDYW-KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 463
            +N  G LKLADFGLA       R   ++ VVTLWYRPP++L GA  Y  S+D+WS GC+FAEL   G+P+  G    +QL +IF+L G+P ++ W   +KLP    + P  P   SL      L  T  +L++ LL   P +R  A  AL   YF+
Sbjct:  134 INRNGELKLADFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYKPY-PMYPATMSLVNVVPKLNATGRDLLQNLLKCNPVQRICADEALQHPYFA 287          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK--KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +N  G LKLADFGLA ++ +   +  ++ VVTLWYRPP++LLG+TDY   +D+W VGC+F E+  G+P+  G T  EQLH IF++ G+P +D W    S     T   P+   ++ LR   + L     +L+  LL  E   R +A  A+   +F
Sbjct:  294 INERGELKLADFGLA-YAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSGQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEDTWPGILSNEEFRTYNYPKYRAEALLRHAPR-LECDGADLLTKLLQFEGRNRISAEDAMKHPFF 446          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 68/164 (41.46%), Postives = 97/164 (59.15%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEV-EQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQ--PYDS-SLRETFKDLP--TTAVNLIETLLSVEPYKRATASAALASEYFSTKP 472
            +++ G LKLADFGLA   +       ++ VVTLWYRPP++LLG+T+Y   +D+W VGC+F E++ G     G  ++ +QL +IF + G+P +D W     LPH   FKP++   Y S SLR+ +  L     A +L   LL   P  R +A AAL+ EYFS  P
Sbjct:  264 ISDTGELKLADFGLARAKSVPSHT-YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH---FKPERFTVYSSKSLRQAWNKLSYVNHAEDLASKLLQCSPKNRLSAQAALSHEYFSDLP 423          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYCU (Cell division control protein 2 homolog OS=Oryzias curvinotus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 67/166 (40.36%), Postives = 92/166 (55.42%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF-----STKPYAC 481
            ++N+GV+KLADFGL+       R   T  VVTLWYR PE+LLG+  Y   VD+WS G +FAEL   KP+  G +E++QL +IF+  G+P +D W     LP      P+     SL    K+L    ++L+  +L   P KR +A  A+   YF     ST P AC
Sbjct:  136 IDNKGVIKLADFGLSRAFGVPVRV-YTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKSTFPKWK-GGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLPAAC 299          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK4_BOVIN (Cell division protein kinase 4 OS=Bos taurus GN=CDK4 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.833e-24
Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 457
            V + G +KLADFGLA   +  ++  LT  VVTLWYR PE+LL +T Y   VD+WSVGC+FAE+   KP+  G +E +QL KIF L G PP+D W +        F P+ P    ++    +L  +   L+  +L+  P+KR +A  AL   Y
Sbjct:  148 VTSGGTVKLADFGLARIYS--YQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFSPRGP--RPVQSVVPELEESGAQLLLEMLTFNPHKRISAFRALQHSY 294          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK4_XENLA (Cell division protein kinase 4 OS=Xenopus laevis GN=cdk4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.394e-24
Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP--QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC 481
            V + G +KLADFGLA   +   +  LT  VVTLWYR PE+LL +T Y   VD+WS GC+FAE+   KP+  G +E +QL KIF + G P ++ W        + F P  QQP D  + E    +     +L+  +L+  P KR +AS AL   +F+  P AC
Sbjct:  148 VTSGGQVKLADFGLARIYSC--QMALTPVVVTLWYRAPEVLLQST-YATPVDVWSAGCIFAEMFKRKPLFCGNSEADQLCKIFDIIGLPSEEEWPVDVTLPRSAFSPRTQQPVDKFVPE----IDAMGADLLLAMLTFSPQKRISASDALLHPFFADDPQAC 302          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK4_MOUSE (Cell division protein kinase 4 OS=Mus musculus GN=Cdk4 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.394e-24
Identity = 62/152 (40.79%), Postives = 88/152 (57.89%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 457
            V + G +KLADFGLA   +  ++  LT  VVTLWYR PE+LL +T Y   VD+WSVGC+FAE+   KP+  G +E +QL KIF L G PP+D W +        F P+ P    ++    ++  +   L+  +L+  P+KR +A  AL   Y
Sbjct:  148 VTSNGTVKLADFGLARIYS--YQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPREVSLPRGAFAPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 294          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.394e-24
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:   20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQP--YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            LKLADFGLA       R   T  VVTLWYR PE+LLG+  Y   VD+WSVGC+FAE++  KP+  G +E+++L KIF+  G+P ++ W   + LP    FK   P      L     +L    ++L+  +L ++P KR TA  AL  EYF
Sbjct:  142 LKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRTLGTPNEETWPGVTSLPD---FKSSFPKWISKDLSAVVPNLDPAGIDLLNKMLCLDPSKRITARNALEHEYF 287          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: KIN28_YEAST (Serine/threonine-protein kinase KIN28 OS=Saccharomyces cerevisiae GN=KIN28 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.127e-24
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 2
Query:   11 EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK--SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPI 502
            +G +K+ADFGLA      H + LTS VVT WYR PELL GA  Y  ++D+WSVG +FAEL++  P L G+ +V+Q+   F+  G+P D  W +  S + +  L     P    LR+ F      A++ +  +L++ P KR TA   L S+YF   P   D SS+ I
Sbjct:  140 DGQIKVADFGLARAIPAPH-EILTSNVVTRWYRAPELLFGAKHYTSAIDIWSVGVIFAELMLRIPYLPGQNDVDQMEVTFRALGTPTDRDWPEVSSFMTYNKLQIYPPPSRDELRKRFIAASEYALDFMCGMLTMNPQKRWTAVQCLESDYFKELPPPSDPSSIKI 304          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK4_PIG (Cell division protein kinase 4 OS=Sus scrofa GN=CDK4 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.127e-24
Identity = 62/152 (40.79%), Postives = 88/152 (57.89%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEY 457
            V + G +KLADFGLA   +  ++  LT  VVTLWYR PE+LL +T Y   VD+WSVGC+FAE+   KP+  G +E +QL KIF L G PP+D W +        F P+ P    ++    ++  +   L+  +L+  P+KR +A  AL   Y
Sbjct:  148 VTSGGTVKLADFGLARIYS--YQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFSPRGP--RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 294          
The following BLAST results are available for this feature:
BLAST of CF503956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK5_XENLA1.403e-2441.67Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDK16_RAT1.403e-2439.35Cell division protein kinase 16 OS=Rattus norvegic... [more]
CDK14_MOUSE1.403e-2441.46Cell division protein kinase 14 OS=Mus musculus GN... [more]
CDC2_ORYCU1.403e-2440.36Cell division control protein 2 homolog OS=Oryzias... [more]
CDK4_BOVIN1.833e-2441.45Cell division protein kinase 4 OS=Bos taurus GN=CD... [more]
CDK4_XENLA2.394e-2440.74Cell division protein kinase 4 OS=Xenopus laevis G... [more]
CDK4_MOUSE2.394e-2440.79Cell division protein kinase 4 OS=Mus musculus GN=... [more]
CDC2_CHERU2.394e-2442.67Cell division control protein 2 homolog OS=Chenopo... [more]
KIN28_YEAST3.127e-2439.76Serine/threonine-protein kinase KIN28 OS=Saccharom... [more]
CDK4_PIG3.127e-2440.79Cell division protein kinase 4 OS=Sus scrofa GN=CD... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-444 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503956 ID=CF503956; Name=CF503956; organism=Citrus sinensis; type=EST; length=721bp
GGTGAACAATGAAGGAGTCCTCAAGTTGGCCGACTTTGGATTGGCAAACT
TCTCTAATACTGGACATCGACAACCCTTAACCAGTCGTGTTGTGACTTTA
TGGTATCGTCCACCCGAACTTTTGCTTGGCGCCACAGATTATGGACCGTC
TGTGGATCTTTGGAGTGTTGGCTGTGTGTTTGCAGAACTTCTCATAGGGA
AACCCATCCTTCAAGGGAGAACGGAGGTAGAACAACTACACAAAATTTTC
AAGCTTTGTGGGTCCCCACCTGATGATTACTGGAAAAAATCAAAACTTCC
TCATGCTACTCTGTTCAAACCACAACAACCTTATGACAGTAGTCTTCGAG
AAACATTCAAAGATTTGCCCACAACTGCCGTGAACCTGATAGAAACTTTA
CTTTCAGTAGAGCCATACAAGCGTGCAACTGCCTCTGCAGCCCTAGCATC
TGAGTATTTCTCAACAAAGCCTTATGCTTGCGATCTGTCAAGTTTGCCAA
TATATCCACCAAGCAAAGAGATTGATGCAAAACATCGTGAAGATGCACGC
AGGAAAAGGGTGGTGGAAGAGTTCGTGGAGCTGAGACAAGAAAGACTACA
CGAAAATCCCATGGAATGAGTAAATTGGCACCCGTAGAGGATGTGGCAGT
GCGGACTCAGTTTGCTAAAAAAATTAACGGACATAGTTGCATATTTTGAA
AGATGATGAGTTGTCTGGTAG
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