CF503956

Overview
NameCF503956
Unique NameCF503956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 62/158 (39.24%), Postives = 89/158 (56.33%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-----KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +NN+G LKL DFGLA           ++ VVTLWYR P++LLG+  Y  S+D+WS GC+FAE+  GKP+  G +  +QL KIF+L G+P +  W       +   +  +F PQ      LR    +L +  +NL+ +LL + P  R TA  AL   +F
Sbjct:  139 INNKGELKLGDFGLARAFGIPFNT-FSNEVVTLWYRAPDVLLGSRAYTASIDIWSAGCIFAEMCTGKPLFPGTSNDDQLIKIFRLMGTPNERTWPGVSSYANFKNNWQIFVPQ-----DLRLLIPNLDSMGLNLLSSLLQMRPDARITARQALQHPWF 290          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 63/162 (38.89%), Postives = 91/162 (56.17%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQP--YDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS--TKP 472
            +N EG +KLADFGLA       R   T  VVTLWYR PE+LLG   Y  +VD+WS+GC+FAE++  + +  G +E++QL +IF+  G+P +  W   + +P    +KP  P        +    L     +L+  +L  +P KR +A AALA  +F   TKP
Sbjct:  135 INTEGAIKLADFGLARAFGVPVRT-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD---YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 59/155 (38.06%), Postives = 88/155 (56.77%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK--KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +N  G LKLADFGLA   +   +   ++ VVTLWYRPP++LLG+TDY   +D+W VGC+F E+  G+P+  G T  EQLH IF++ G+P ++ W    S     T   P+   ++ L    + L +   +L+  LL  E   R +A  A+   +F
Sbjct:  294 INERGELKLADFGLARAKSIPTKT-YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPR-LDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 446          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 59/152 (38.82%), Postives = 88/152 (57.89%), Query Frame = 2
Query:    8 NEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +   +KLADFGLA       R   T  VVTLWYR PE+LLG+  Y   VD+WSVGC+FAE++  +P+  G +E+++L KIF++ G+P ++ W   + LP      P+ P    L     +L    ++L+ +   ++P +R TA  AL  EYF
Sbjct:  138 SSNAVKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETWPGVTSLPDFKSAFPKWP-AKDLATQVPNLEPAGLDLLSSTCRLDPTRRITARGALEHEYF 287          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDKL4_HUMAN (Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=CDKL4 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 60/157 (38.22%), Postives = 86/157 (54.78%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGS--PPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST 466
            +  +G++K+ DFG A     G     T  V T WYR PELL+G T YG SVD+W++GCVFAELL G+P+  G+++V+QL+ I +  G   P      KS      +  P+     +L E F D+   A+N ++  L + P  R T S  L S YF +
Sbjct:  134 ITKQGIIKICDFGFAQILIPG--DAYTDYVATRWYRAPELLVGDTQYGSSVDIWAIGCVFAELLTGQPLWPGKSDVDQLYLIIRTLGKLIPRHQSIFKSNGFFHGISIPEPEDMETLEEKFSDVHPVALNFMKGCLKMNPDDRLTCSQLLESSYFDS 288          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK7_DICDI (Cell division protein kinase 7 OS=Dictyostelium discoideum GN=cdk7 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 2
Query:   14 GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLF--KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPI 502
            G LKLADFGLA    + ++   + + VT++YR PELL GA  YGPSVD+WS+GC+FAEL++  P L G  E++QL KI    G+P +  W   + LP+   F   P  P+    ++ F      A++LI  +L   P  R +A+ AL   YF++     + + LP+
Sbjct:  142 GDLKLADFGLARQYGSPNKV-FSPQAVTIFYRAPELLFGAKSYGPSVDIWSIGCIFAELMLRTPYLPGTGEIDQLRKICSALGTPNESNWPGVTCLPNYIKFTDHPATPF----KQLFTAASDEAIDLISKMLLFNPSNRISAADALNHPYFTSGVKHTNPADLPV 302          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 59/159 (37.11%), Postives = 88/159 (55.35%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYW------KKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +N  G LKLADFGLA   +   +   ++ VVTLWYRPP++LLG+++Y   +D+W VGC+F E+  G+P+  G T  ++LH IF+L G+P  + W       + K  +   +KPQ   + + R     L +  + LI   L  E  KR  A  A+   YF
Sbjct:  321 INERGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLINHAPR-----LDSEGIELITKFLQYESKKRVPAEEAMKHVYF 473          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 59/154 (38.31%), Postives = 87/154 (56.49%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            ++ EG LKLADFGLA       R   T  VVTLWYR PE+LLG   Y   VD+WSVG +FAE+   KP+  G +E++++ KIFKL G+P ++ W   +  P      P+   + + R+    L    ++L++ +L  +P +R +A  A    YF
Sbjct:  156 IDREGNLKLADFGLARAFGVPLRT-YTHEVVTLWYRAPEILLGGRQYSTGVDMWSVGAIFAEMCTRKPLFPGDSEIDEIFKIFKLLGTPDENTWPGVTSFPDFKASFPKWKREDT-RKLVPGLERNGLDLLDAMLEYDPARRISAKQACMHPYF 307          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23
Identity = 62/166 (37.35%), Postives = 93/166 (56.02%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLP 499
            ++++GV+KLADFGLA       R   T  VVTLWYR PE+LLG+  Y   VD+WS+G +FAE+   KP+  G +E++QL +IF+  G+P ++ W + +          +    SL    K++    ++L+  +L  +P KR +A  AL   YF       D SSLP
Sbjct:  136 IDSKGVIKLADFGLARAFGIPVRV-YTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNSFPKWKGGSLSANVKNIDKDGLDLLAKMLIYDPAKRISARKALLHPYFDD----LDKSSLP 296          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: MKC1_CANAL (Mitogen-activated protein kinase MKC1 OS=Candida albicans GN=MKC1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 66/201 (32.84%), Postives = 107/201 (53.23%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLAN-FSNTGHRQP--LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY--DSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDARRKRVVEEFVELRQ 589
            VN +  LK+ DFGLA  FS         +T  V T WYR PE++L  T+Y  ++D+WSVGC+ AELL GKP+ +G+  V+QL++I  + G+PP+   ++     A  +    P    +S  E F D    A++L+E +L+++P +R T   AL  +Y               + P +EI+ + + D +    V+   E++Q
Sbjct:  182 VNADCELKICDFGLARGFSENPDENAGFMTEYVATRWYRAPEIMLSFTNYTKAIDIWSVGCILAELLGGKPLFRGKDYVDQLNQILMILGTPPESTLQRIGSHRAQNYVRSLPITRKASYEELFPDANPLALDLLERMLTLDPRERITVRDALNHKYLEL-----------WHDPKEEIECQVKFDFKSFETVDGLDEMKQ 371          
The following BLAST results are available for this feature:
BLAST of CF503956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PHO85_DEBHA2.027e-2339.24Negative regulator of the PHO system OS=Debaryomyc... [more]
CDK2_HUMAN2.027e-2338.89Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDK16_HUMAN2.027e-2338.06Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDC22_MEDSA2.027e-2338.82Cell division control protein 2 homolog 2 OS=Medic... [more]
CDKL4_HUMAN2.647e-2338.22Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=... [more]
CDK7_DICDI2.647e-2338.55Cell division protein kinase 7 OS=Dictyostelium di... [more]
CDK17_MOUSE2.647e-2337.11Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDC2_AJECA2.647e-2338.31Cell division control protein 2 OS=Ajellomyces cap... [more]
CDC2A_XENLA2.647e-2337.35Cell division control protein 2-A OS=Xenopus laevi... [more]
MKC1_CANAL3.457e-2332.84Mitogen-activated protein kinase MKC1 OS=Candida a... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-444 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503956 ID=CF503956; Name=CF503956; organism=Citrus sinensis; type=EST; length=721bp
GGTGAACAATGAAGGAGTCCTCAAGTTGGCCGACTTTGGATTGGCAAACT
TCTCTAATACTGGACATCGACAACCCTTAACCAGTCGTGTTGTGACTTTA
TGGTATCGTCCACCCGAACTTTTGCTTGGCGCCACAGATTATGGACCGTC
TGTGGATCTTTGGAGTGTTGGCTGTGTGTTTGCAGAACTTCTCATAGGGA
AACCCATCCTTCAAGGGAGAACGGAGGTAGAACAACTACACAAAATTTTC
AAGCTTTGTGGGTCCCCACCTGATGATTACTGGAAAAAATCAAAACTTCC
TCATGCTACTCTGTTCAAACCACAACAACCTTATGACAGTAGTCTTCGAG
AAACATTCAAAGATTTGCCCACAACTGCCGTGAACCTGATAGAAACTTTA
CTTTCAGTAGAGCCATACAAGCGTGCAACTGCCTCTGCAGCCCTAGCATC
TGAGTATTTCTCAACAAAGCCTTATGCTTGCGATCTGTCAAGTTTGCCAA
TATATCCACCAAGCAAAGAGATTGATGCAAAACATCGTGAAGATGCACGC
AGGAAAAGGGTGGTGGAAGAGTTCGTGGAGCTGAGACAAGAAAGACTACA
CGAAAATCCCATGGAATGAGTAAATTGGCACCCGTAGAGGATGTGGCAGT
GCGGACTCAGTTTGCTAAAAAAATTAACGGACATAGTTGCATATTTTGAA
AGATGATGAGTTGTCTGGTAG
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