CF503956

Overview
NameCF503956
Unique NameCF503956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25
Identity = 62/159 (38.99%), Postives = 89/159 (55.97%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYD------SSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +N  G LKLADFGLA   +   +   ++ VVTLWYRPP++LLG+T+Y   +D+W VGC+  E+  G+P+  G T  E+LH IF+L G+P ++ W     P  T F   + Y         L      L T  ++L+ +LL  E   R +A AAL+  YF
Sbjct:  271 INERGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETW-----PGVTAFSEFRTYSFPCYLPQPLINHAPRLDTDGIHLLSSLLLYESKSRMSAEAALSHSYF 423          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 2
Query:   20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            LKLADFGLA       R   T  VVTLWYR PE+LLG+  Y   VD+WSVGC+FAE++  +P+  G +E+++L KIF++ G+P ++ W   + LP      P+ P    L     +L    +NL+ ++L ++P KR TA  A+  EYF
Sbjct:  142 LKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEETWPGVTALPDFKSTFPKWP-PKDLATVVPNLDAAGLNLLSSMLCLDPSKRITARIAVEHEYF 287          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 68/166 (40.96%), Postives = 93/166 (56.02%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF-----STKPYAC 481
            ++N+GV+KLADFGLA       R   T  VVTLWYR PE+LLG+  Y   VD+WS G +FAEL   KP+  G +E++QL +IF+  G+P +D W     LP      P+   + SL    K+L    ++L+  +L   P KR +A  A+   YF     ST P AC
Sbjct:  136 IDNKGVIKLADFGLARAFGVPVRV-YTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKWK-EGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLPAAC 299          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 68/166 (40.96%), Postives = 93/166 (56.02%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF-----STKPYAC 481
            ++N+GV+KLADFGLA       R   T  VVTLWYR PE+LLG+  Y   VD+WS G +FAEL   KP+  G +E++QL +IF+  G+P +D W     LP      P+   + SL    K+L    ++L+  +L   P KR +A  A+   YF     ST P AC
Sbjct:  136 IDNKGVIKLADFGLARAFGVPVRV-YTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNDVWPDVESLPDYKNTFPKW-MEGSLSSMVKNLDKNGLDLLAKMLIYNPPKRISAREAMTHPYFDDLDKSTLPAAC 299          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 68/149 (45.64%), Postives = 87/149 (58.39%), Query Frame = 2
Query:   20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLP-HATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            LKLADFGLA       R   T  VVTLWYR PE+LLGA  Y   VD+WSVGC+FAE++  KP+  G +E+++L KIF++ G+P +  W   S LP   T F   Q  D  L     +L    ++L+  +L  EP KR TA  AL  EYF
Sbjct:  142 LKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDFKTAFPRWQAQD--LATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYF 287          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY--DSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +N EGVLKLADFGLA       R   T  VVTLWYR P++L+G+  Y  +VD+WSVGC+FAE++ G P+  G +E +QL +IFK+ G+P  D W   ++ +   + P   Y    +       L  + ++LI  +L ++P +R +A  AL  +YF
Sbjct:  133 INREGVLKLADFGLARAFAIPVRS-YTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPNVDSW--PQVVNLPAYNPDFCYYEKQAWSSIVPKLNESGIDLISRMLQLDPVQRISAKEALKHDYF 284          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: SSN3_YARLI (Serine/threonine-protein kinase SSN3 OS=Yarrowia lipolytica GN=SSN3 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25
Identity = 74/179 (41.34%), Postives = 98/179 (54.75%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLAN-FSNTGHRQPLTSR------VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQG-------RTEV----EQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTT---AVNLIETLLSVEPYKRATASAALASEYFSTKP 472
            V ++GVLK+ D GLA  FSN     PL S       VVT+WYR PELLLGA  Y P+VDLW+VGC+FAELL  +PI +G       +T V     Q+ KI ++ GSP +D W   SK P     K  + +  +L   ++ +  T      L+  LL  +P KR TA+ AL   YF+  P
Sbjct:  181 VTSDGVLKIGDLGLARLFSN-----PLQSLYSGDKVVVTIWYRAPELLLGARHYSPAVDLWAVGCIFAELLALRPIFKGEEAKMDNKTNVPFQRNQMQKIIEILGSPQEDDWPSLSKFPEYESLKQMKTFPPNLEAWYQSIGGTNQKGFQLLSRLLEYDPAKRLTANDALLHPYFTEAP 354          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25
Identity = 64/149 (42.95%), Postives = 89/149 (59.73%), Query Frame = 2
Query:   20 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWK-KSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 463
            LK+AD GL+  S T   +  T  ++TLWYR PE+LLGA  Y   VD+WSVGC+FAEL   +P+  G +EV+QL  IFKL G+P +  W   SKLP+   +    P  S + +    L   A++L+E +L  EP KR +A  A+   YF+
Sbjct:  174 LKIADLGLSR-SFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAELATNQPLFAGDSEVQQLLHIFKLLGTPNEQVWPGVSKLPNWHEYPQWNP--SKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYFN 319          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25
Identity = 62/159 (38.99%), Postives = 88/159 (55.35%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYD------SSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF 460
            +N  G LKLADFGLA   +   +   ++ VVTLWYRPP++LLG+T+Y   +D+W VGC+  E+  G+P+  G T  E+LH IF+L G+P ++ W     P  T F   + Y         L      L T  + L+ +LL  E   R +A AAL+  YF
Sbjct:  271 INERGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETW-----PGVTAFSEFRTYSFPRYLPQPLISHAPRLDTDGIQLLSSLLLYESKSRMSAEAALSHPYF 423          
BLAST of CF503956 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.300e-25
Identity = 65/165 (39.39%), Postives = 100/165 (60.61%), Query Frame = 2
Query:    2 VNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYW-KKSKLPHAT--LFKPQ-----QPYDSSLRET---FKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS 463
            ++ E  LKL DFGL        R+  T+ VVTLWYRPP++LLG+  YGP VD+WSVGC+F+E+  G P+  G+ + +QL +IF+  G+P +  W   ++ P++   L +P+     +P  S++  +   ++ L    V+L+E LL  EP +R TA+ AL   YFS
Sbjct:  135 ISREKELKLGDFGLGRSFAIPVRK-FTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGTPLFAGKNDADQLMRIFRFLGTPNNRVWPSMNQYPNSNNMLSQPEFLQNFEPEWSNVLGSVPGYEKLGCAGVDLLERLLRYEPSERITAADALNHPYFS 298          
The following BLAST results are available for this feature:
BLAST of CF503956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK18_HUMAN2.828e-2538.99Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CDC2_VIGAC3.693e-2541.89Cell division control protein 2 homolog OS=Vigna a... [more]
CDC2_ORYLA3.693e-2540.96Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA3.693e-2540.96Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_MAIZE3.693e-2545.64Cell division control protein 2 homolog OS=Zea may... [more]
CDC2H_THEAN3.693e-2540.00Cell division control protein 2 homolog OS=Theiler... [more]
SSN3_YARLI4.824e-2541.34Serine/threonine-protein kinase SSN3 OS=Yarrowia l... [more]
CKB21_ORYSJ4.824e-2542.95Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CDK18_PONAB4.824e-2538.99Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CRK1_LEIME6.300e-2539.39Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-444 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503956 ID=CF503956; Name=CF503956; organism=Citrus sinensis; type=EST; length=721bp
GGTGAACAATGAAGGAGTCCTCAAGTTGGCCGACTTTGGATTGGCAAACT
TCTCTAATACTGGACATCGACAACCCTTAACCAGTCGTGTTGTGACTTTA
TGGTATCGTCCACCCGAACTTTTGCTTGGCGCCACAGATTATGGACCGTC
TGTGGATCTTTGGAGTGTTGGCTGTGTGTTTGCAGAACTTCTCATAGGGA
AACCCATCCTTCAAGGGAGAACGGAGGTAGAACAACTACACAAAATTTTC
AAGCTTTGTGGGTCCCCACCTGATGATTACTGGAAAAAATCAAAACTTCC
TCATGCTACTCTGTTCAAACCACAACAACCTTATGACAGTAGTCTTCGAG
AAACATTCAAAGATTTGCCCACAACTGCCGTGAACCTGATAGAAACTTTA
CTTTCAGTAGAGCCATACAAGCGTGCAACTGCCTCTGCAGCCCTAGCATC
TGAGTATTTCTCAACAAAGCCTTATGCTTGCGATCTGTCAAGTTTGCCAA
TATATCCACCAAGCAAAGAGATTGATGCAAAACATCGTGAAGATGCACGC
AGGAAAAGGGTGGTGGAAGAGTTCGTGGAGCTGAGACAAGAAAGACTACA
CGAAAATCCCATGGAATGAGTAAATTGGCACCCGTAGAGGATGTGGCAGT
GCGGACTCAGTTTGCTAAAAAAATTAACGGACATAGTTGCATATTTTGAA
AGATGATGAGTTGTCTGGTAG
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