CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRA3 (6-phospho-beta-galactosidase OS=Streptococcus agalactiae serotype III GN=lacG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.935e-24
Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGV +Y++L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGYGEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRSV (6-phospho-beta-galactosidase OS=Streptococcus sanguinis (strain SK36) GN=lacG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.139e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            +SLP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KSLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHKYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGEVNPKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRGC (6-phospho-beta-galactosidase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=lacG PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 5.139e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            +SLP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KSLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHKYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGEVNPKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_LACRH (6-phospho-beta-galactosidase OS=Lactobacillus rhamnosus GN=lacG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.139e-24
Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  160 RESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            R+ LP  FV G AT+AYQVEG   +DG+G  +WD F +K G      + D + D YHRY ED+ +         R SI+WSRIFP G G V  +GVA+Y++L     K  + P+  L+H+D PE L
Sbjct:    2 RKQLPKDFVIGGATAAYQVEGATKEDGKGRVLWDDFLEKQG----RFSPDPAADFYHRYDEDLALAEAYGHQVIRLSIAWSRIFPDGAGAVEPRGVAFYHRLFAACAKHHLIPFVTLHHFDTPERL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRPM (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M28 GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRPG (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRPD (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRPC (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRPB (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRP6 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M6 GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STRA33.935e-2442.406-phospho-beta-galactosidase OS=Streptococcus agal... [more]
LACG_STRSV5.139e-2443.206-phospho-beta-galactosidase OS=Streptococcus sang... [more]
LACG_STRGC5.139e-2443.206-phospho-beta-galactosidase OS=Streptococcus gord... [more]
LACG_LACRH5.139e-2443.656-phospho-beta-galactosidase OS=Lactobacillus rham... [more]
LACG_STRPM6.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPG6.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPD6.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPC6.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPB6.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRP66.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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