CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRP3 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M3 GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRP1 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M1 GN=lacG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.712e-24
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRPF (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=lacG PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.145e-23
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGDVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRP8 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M18 GN=lacG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.145e-23
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G VN KGV YY+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGDVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRMU (6-phospho-beta-galactosidase OS=Streptococcus mutans GN=lacG PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.145e-23
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D YH+Y  D+ +      +  R SI+WSRIFP G G VN KG+A+Y+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHADGKGPVAWDKYLEDNYWY----TAEPASDFYHQYPVDLKLAEEFGVNGIRISIAWSRIFPKGYGAVNPKGLAFYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: KLOT_RAT (Klotho OS=Rattus norvegicus GN=Kl PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 1
Query:   58 LLLGTVTIRCAA-----GTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANN----------------ATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            LLL T+  RC +     G   +   A+P     +  GL  ++ P+GF++   ++AYQ EG   + G+G SIWD F   P  +  +                +TGDV+ D Y+    D + +  L    YRFSISW+R+ P GT G  N +G+ YY +L+  L + G+ P   LYH+DLP+ L+
Sbjct:   23 LLLLTLRARCLSAEPGQGAQTWARFARPPVP--EASGLLHDTFPDGFLWAVGSAAYQTEGGWRQHGKGASIWDTFTHHPRAIPEDSPIVMAPSGAPLPPLPSTGDVASDSYNNVYRDTEGLRELGVTHYRFSISWARVLPNGTAGTPNREGLRYYRRLLERLRELGVQPVVTLYHWDLPQRLQ 203          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL38_ARATH (Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.953e-23
Identity = 66/172 (38.37%), Postives = 97/172 (56.40%), Query Frame = 1
Query:   43 SFYFSLLLGTVTIRCAAGTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFA----KKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +F F L L T       G  +  E  +P T +  T   +  +   GF+FG A+SAYQVEG     GRG ++WD F     +K G  A+   GD + D Y  +++D+D+M  LN   YRFSI+WSR+ P G  +  VN   + YYN LI+ L+ + +TP+  L+H+DLP+ L+
Sbjct:    7 AFVFLLALAT-----CKGDEFVCEENEPFTCN-QTKLFNSGNFEKGFIFGVASSAYQVEGGR---GRGLNVWDSFTHRFPEKGG--ADLGNGDTTCDSYTLWQKDIDVMDELNSTGYRFSIAWSRLLPKGKRSRGVNPGAIKYYNGLIDGLVAKNMTPFVTLFHWDLPQTLQ 167          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRZJ (6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain JJA) GN=lacG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STRPJ (6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNVKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG2_STRR6 (6-phospho-beta-galactosidase 2 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=lacG2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STRP36.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRP16.712e-2443.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPF1.145e-2343.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRP81.145e-2343.206-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRMU1.145e-2342.406-phospho-beta-galactosidase OS=Streptococcus muta... [more]
KLOT_RAT1.953e-2333.88Klotho OS=Rattus norvegicus GN=Kl PE=1 SV=1[more]
BGL38_ARATH1.953e-2338.37Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 ... [more]
LACG_STRZJ2.550e-2342.406-phospho-beta-galactosidase OS=Streptococcus pneu... [more]
LACG_STRPJ2.550e-2342.406-phospho-beta-galactosidase OS=Streptococcus pneu... [more]
LACG2_STRR62.550e-2342.406-phospho-beta-galactosidase 2 OS=Streptococcus pn... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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