CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG2_STRPN (6-phospho-beta-galactosidase 2 OS=Streptococcus pneumoniae GN=lacG2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.550e-23
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  H DG+GP  WD + +         T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL
Sbjct:    3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEAL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL37_ARATH (Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.350e-23
Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = 1
Query:   52 FSLLLGTVTIRCAAGTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFA----KKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            F+L +  V   C        E   P T    T   +++   + F+FG A+SAYQ+EG     GRG ++WD F     +K G  A+   GD + D Y  +++D+D+M  L    YRFS +WSRI P G  +  +N  G+ YY+ LI+ L+ R ITP+  L+H+DLP++L+
Sbjct:   17 FALAILLVVATCKPEEEITCEENVPFTCS-QTDRFNKQDFESDFIFGVASSAYQIEGGR---GRGLNVWDGFTHRYPEKGG--ADLGNGDTTCDSYRTWQKDLDVMEELGVKGYRFSFAWSRILPKGKRSRGINEDGINYYSGLIDGLIARNITPFVTLFHWDLPQSLQ 179          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_LACCB (6-phospho-beta-galactosidase OS=Lactobacillus casei (strain BL23) GN=lacG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.691e-23
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            + LP  FV G AT+AYQVEG   +DG+G  +WD F  K G        D + D YHRY ED+ +         R SI+WSRIFP G G+V  +GVA+Y++L        I P+  L+H+D PE L
Sbjct:    3 KQLPQDFVMGGATAAYQVEGATKEDGKGRVLWDDFLDKQG----RFKPDPAADFYHRYDEDLALAEKYGHQVIRVSIAWSRIFPDGAGEVEPRGVAFYHKLFADCAAHHIEPFVTLHHFDTPERL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_LACCA (6-phospho-beta-galactosidase OS=Lactobacillus casei GN=lacG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.691e-23
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            + LP  FV G AT+AYQVEG   +DG+G  +WD F  K G        D + D YHRY ED+ +         R SI+WSRIFP G G+V  +GVA+Y++L        I P+  L+H+D PE L
Sbjct:    3 KQLPQDFVMGGATAAYQVEGATKEDGKGRVLWDDFLDKQG----RFKPDPAADFYHRYDEDLALAEKYGHQVIRVSIAWSRIFPDGAGEVEPRGVAFYHKLFADCAAHHIEPFVTLHHFDTPERL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAES (6-phospho-beta-galactosidase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.266e-22
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            + LP+ F+FG AT+AYQ EG    DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PE L
Sbjct:    3 KKLPDDFIFGGATAAYQAEGATQTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSERFGVNGIRISIAWSRIFPKGYGEVNQKGVEYYHNLFKECHKRHVEPFVTLHHFDTPEVL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAEQ (6-phospho-beta-galactosidase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.266e-22
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            + LP+ F+FG AT+AYQ EG    DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PE L
Sbjct:    3 KKLPDDFIFGGATAAYQAEGATQTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSERFGVNGIRISIAWSRIFPKGYGEVNQKGVEYYHNLFKECHKRHVEPFVTLHHFDTPEVL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAW (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MW2) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAU (6-phospho-beta-galactosidase OS=Staphylococcus aureus GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAT (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAS (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MSSA476) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG2_STRPN2.550e-2342.406-phospho-beta-galactosidase 2 OS=Streptococcus pn... [more]
BGL37_ARATH4.350e-2336.69Myrosinase 2 OS=Arabidopsis thaliana GN=TGG2 PE=1 ... [more]
LACG_LACCB9.691e-2343.206-phospho-beta-galactosidase OS=Lactobacillus case... [more]
LACG_LACCA9.691e-2343.206-phospho-beta-galactosidase OS=Lactobacillus case... [more]
LACG_STAES1.266e-2240.806-phospho-beta-galactosidase OS=Staphylococcus epi... [more]
LACG_STAEQ1.266e-2240.806-phospho-beta-galactosidase OS=Staphylococcus epi... [more]
LACG_STAAW2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAU2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAT2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAS2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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