CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAR (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain MRSA252) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAN (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain N315) GN=lacG PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAM (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=lacG PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAE (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Newman) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAAB (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAA9 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH9) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAA8 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain NCTC 8325) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAA3 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain USA300) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAA2 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH1) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
[Close]
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LACG_STAA1 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=lacG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.159e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            ++LP  F+FG AT+AYQ EG  + DG+G   WD + ++        T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L
Sbjct:    3 KTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVL 123
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STAAR2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAN2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAM2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAE2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAAB2.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA92.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA82.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA32.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA22.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA12.159e-2240.806-phospho-beta-galactosidase OS=Staphylococcus aur... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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