CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL11_ARATH (Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 3.666e-38
Identity = 75/128 (58.59%), Postives = 94/128 (73.44%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            SR   P GFVFG+ TSAYQVEG A +DGR PSIWDVFA      +  A G+V+ DQYH+YKEDV +MA++  +AYRFSISWSR+ P G G +N KG+ YYN LI+ L+  GI P+  L+H+DLP+ALE
Sbjct:   27 SRNDFPPGFVFGSGTSAYQVEGAADEDGRTPSIWDVFAHAGH--SGVAAGNVACDQYHKYKEDVKLMADMGLEAYRFSISWSRLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQALE 152          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL13_ORYSJ (Beta-glucosidase 13 OS=Oryza sativa subsp. japonica GN=BGLU13 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 6.253e-38
Identity = 73/132 (55.30%), Postives = 97/132 (73.48%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +SR S P GF+FGTA+S+YQ EG A + GRGPSIWD F  + P  +A+ + GDV+ D YH YKEDV IM ++  DAYRFSISW+RI P G  +G +N +G++YYN LIN LL +G+ P+  L+H+D P+ALE
Sbjct:   30 ISRRSFPEGFIFGTASSSYQYEGGAREGGRGPSIWDTFTHQHPDKIADKSNGDVAADSYHLYKEDVRIMKDMGVDAYRFSISWTRILPNGSLSGGINREGISYYNNLINELLLKGVQPFVTLFHWDSPQALE 161          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL32_ORYSJ (Beta-glucosidase 32 OS=Oryza sativa subsp. japonica GN=BGLU32 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 8.166e-38
Identity = 72/133 (54.14%), Postives = 91/133 (68.42%), Query Frame = 1
Query:  142 DTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            D   L+R   P GFVFG  TSA+QVEG A +DGR PSIWD F  + G     A  DVS DQYH YKEDV +M ++  DAYRFSI+W R+ P G G++N KG+ YYN LI+ L+  GI P+  +YH+DLP+AL+
Sbjct:   27 DASALTRHDFPEGFVFGAGTSAFQVEGAAAEDGRKPSIWDTFTHQ-GYSPGGAIADVSADQYHHYKEDVKLMYDMGLDAYRFSIAWPRLIPDGRGEINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQALQ 158          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLA_CLOTH (Beta-glucosidase A OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.819e-37
Identity = 68/129 (52.71%), Postives = 95/129 (73.64%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +S+ + P  F++G+AT+AYQ+EG  ++DG+G SIWD F+  PG +A+  TGDV+ D YHRY+ED+ IM  +   +YRFSISW RIFP GTGK+N KG+ +Y +L N LL+ GI P   LYH+DLP+ L+
Sbjct:    1 MSKITFPKDFIWGSATAAYQIEGAYNEDGKGESIWDRFSHTPGNIADGHTGDVACDHYHRYEEDIKIMKEIGIKSYRFSISWPRIFPEGTGKLNQKGLDFYKRLTNLLLENGIMPAITLYHWDLPQKLQ 129          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL15_ARATH (Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGLU15 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.819e-37
Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = 1
Query:  145 TGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            T  L R   P  F+FG+ATSAYQVEG AH+DGRGPSIWD F++K P  + + + G V+ + YH YKEDV ++  + F+AYRFSISWSRI P G   G +N  G+ YYN LIN LL +GI P+A ++H+D P+ALE
Sbjct:   28 TPKLRRSDFPEDFIFGSATSAYQVEGGAHEDGRGPSIWDTFSEKYPEKIKDGSNGSVADNSYHLYKEDVALLHQIGFNAYRFSISWSRILPRGNLKGGINQAGIDYYNNLINELLSKGIKPFATMFHWDTPQALE 162          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.819e-37
Identity = 81/174 (46.55%), Postives = 109/174 (62.64%), Query Frame = 1
Query:   28 LAVAASFYFSLLLGTVTIRCAAGTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +A A +    LLL  + +   A  +Y      P         +SR S P GF+FGTA+S+YQ EG A + GRGPSIWD F  + P  +A+ + GDV+ D YH YKEDV +M ++  DAYRFSISW+RI P G+  G VN +G+ YYN LIN LL +G+ P+  L+H+D P+ALE
Sbjct:    1 MAAAGAMPGGLLLTFLLLAVVASGAYNGAGEPP---------VSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALE 165          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL33_ORYSJ (Probable inactive beta-glucosidase 33 OS=Oryza sativa subsp. japonica GN=BGLU33 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 4.053e-37
Identity = 69/133 (51.88%), Postives = 93/133 (69.92%), Query Frame = 1
Query:  142 DTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +   L+R   P GFVFG  +SA+QVEG A +DGR PSIWD F  + G + + +  DVS DQYH YKEDV +M ++  DAYRFSI+W R+ P G G++N KG+ YYN LI+ L+  GI P+  +YH+DLP+AL+
Sbjct:   27 EASALTRHDFPEGFVFGAGSSAFQVEGAAAEDGRKPSIWDTFINQ-GYMPDGSNADVSADQYHHYKEDVKLMYDMGLDAYRFSIAWPRLIPDGRGEINPKGLEYYNNLIDELIMHGIQPHVTIYHFDLPQALQ 158          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: HIUH_SOYBN (Hydroxyisourate hydrolase OS=Glycine max GN=HIUH PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.029e-37
Identity = 75/128 (58.59%), Postives = 89/128 (69.53%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            SR+  P  FVFG+ TSAYQVEG A+KDGR PSIWD FA      A+   GDV+ D YH+YKEDV +M     DAYRFSISWSR+ P G G VN KG+ Y N LIN L+  GI P+A LY++DLP+ LE
Sbjct:   36 SRDDFPLDFVFGSGTSAYQVEGAANKDGRTPSIWDTFAYAG--YAHGENGDVACDGYHKYKEDVQLMLETGLDAYRFSISWSRLLPNGRGPVNPKGLQYSNNLINELISNGIQPHATLYNFDLPQVLE 161          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL14_ARATH (Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 9.029e-37
Identity = 72/138 (52.17%), Postives = 94/138 (68.12%), Query Frame = 1
Query:  136 HFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            H  T  L +   P  F+FG ATSAYQVEG A +DGRGPSIWD F++K P  + + + G ++ D YH YKEDV ++  + F+AYRFSISWSRI P G   G +N  G+ YYN LIN LL +GI P+A ++H+D P+ LE
Sbjct:   24 HSSTPKLRKTDFPEDFIFGAATSAYQVEGAAQEDGRGPSIWDTFSEKYPEKIKDGSNGSIADDSYHLYKEDVGLLHQIGFNAYRFSISWSRILPRGNLKGGINQAGIDYYNNLINELLSKGIKPFATIFHWDTPQDLE 161          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.029e-37
Identity = 84/176 (47.73%), Postives = 109/176 (61.93%), Query Frame = 1
Query:   28 LAVAASFYFS--LLLGTVTIRCAAGTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +AVA +   S  +LL  +   CAA   Y D    P         +SR S P GF+FGT++S+YQ EG A K GRGPSIWD F  + P  + + + GD + + YH YKEDV IM  +  DAYRFSISWSRI P G  +G VN +G+ YYN LIN LL + + P+A L+H+D P+ALE
Sbjct:    1 MAVAGAMVMSGGVLLLLLAFTCAA---YNDAGELPP--------ISRRSFPKGFIFGTSSSSYQFEGAAAKGGRGPSIWDTFTHQYPDKITDKSNGDGACNSYHLYKEDVRIMKEMGMDAYRFSISWSRILPNGSLSGGVNREGINYYNNLINELLSKEVQPFATLFHFDTPQALE 165          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL11_ARATH3.666e-3858.59Beta-glucosidase 11 OS=Arabidopsis thaliana GN=BGL... [more]
BGL13_ORYSJ6.253e-3855.30Beta-glucosidase 13 OS=Oryza sativa subsp. japonic... [more]
BGL32_ORYSJ8.166e-3854.14Beta-glucosidase 32 OS=Oryza sativa subsp. japonic... [more]
BGLA_CLOTH1.819e-3752.71Beta-glucosidase A OS=Clostridium thermocellum (st... [more]
BGL15_ARATH1.819e-3754.81Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGL... [more]
BGL12_ORYSJ1.819e-3746.55Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]
BGL33_ORYSJ4.053e-3751.88Probable inactive beta-glucosidase 33 OS=Oryza sat... [more]
HIUH_SOYBN9.029e-3758.59Hydroxyisourate hydrolase OS=Glycine max GN=HIUH P... [more]
BGL14_ARATH9.029e-3752.17Beta-glucosidase 14 OS=Arabidopsis thaliana GN=BGL... [more]
BGL10_ORYSJ9.029e-3747.73Beta-glucosidase 10 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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