CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL28_ORYSJ (Beta-glucosidase 28 OS=Oryza sativa subsp. japonica GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.905e-35
Identity = 66/133 (49.62%), Postives = 96/133 (72.18%), Query Frame = 1
Query:  148 GGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            G L+R S P GF+FGT TSAYQ EG   K  RG +IWD F++ PG +A+ +  D++ D YHRYKED++++  +N D++RFSI+WSRI P GT  G +N +GV +YN LIN ++ +G+ P+  ++H+D P+ALE
Sbjct:   24 GALNRHSFPEGFLFGTGTSAYQYEGAVDK--RGQNIWDTFSRIPGKIADGSNADIANDFYHRYKEDLNLITAMNMDSFRFSIAWSRILPNGTISGGINKEGVEFYNSLINEVIAKGLKPFVTIFHFDTPQALE 154          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL22_ORYSJ (Beta-glucosidase 22 OS=Oryza sativa subsp. japonica GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.905e-35
Identity = 79/175 (45.14%), Postives = 105/175 (60.00%), Query Frame = 1
Query:   16 MRVPLAVAASFYFSLLLGTVTIRCAAGTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            M V  + +    FSLLL  + +  A   S    AA    ++F     +R+  P  FVFG  TSAYQ EG   +DGR PSIWD F    G + + +TGD+    YH+YKEDV +M++ + +AYRFSISWSR+ P G G VN KG+ YYN LI+ L++RGI  +  LYH D P+ LE
Sbjct:    1 MAVSSSTSTCSSFSLLLLLLLLAAAPWRSGEAAAAAARALNF-----TRQDFPGEFVFGAGTSAYQYEGATDEDGRSPSIWDTFTHA-GKMPDKSTGDMGAGGYHKYKEDVKLMSDTSLEAYRFSISWSRLIPRGRGPVNPKGLEYYNSLIDELVERGIEIHVTLYHLDFPQILE 169          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL1A_PHACH (Beta-glucosidase 1A OS=Phanerochaete chrysosporium GN=BGL1A PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.905e-35
Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +S   LP  FV+G AT+AYQ+EG   KDGR PSIWD F K PG +A+ ++GDV+ D Y+R++EDV ++ +    AYRFS+SWSRI P G  +  VN  G+ +Y  LI  L+K GITP+  LYH+DLP+AL+
Sbjct:    1 MSAAKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIADGSSGDVATDSYNRWREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALD 131          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLA_PAEPO (Beta-glucosidase A OS=Paenibacillus polymyxa GN=bglA PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.793e-35
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 1
Query:  172 PNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            P  F++GTAT+AYQ+EG   +DGRG SIWD FA  PG V N   G+V+ D YHRY+ED+ +M  L    YRFS+SW RIFP G G+VN +G+ YY+++++ L   GI P+  LYH+DLP+AL+
Sbjct:    7 PQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQ 129          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL35_ORYSJ (Putative beta-glucosidase 35 OS=Oryza sativa subsp. japonica GN=BGLU35 PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 3.793e-35
Identity = 65/126 (51.59%), Postives = 92/126 (73.02%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLP 528
            SR S P  F+FGT ++AYQ EG   + G+GPSIWD F   PG + NN TGDV+ D YHRYKEDV+++ ++N DA+RFSI+W+RI P G  +G +N +GVA+YN LIN ++ +G+ P+  ++H+D P
Sbjct:   30 SRYSFPKDFIFGTGSAAYQYEGAYKEGGKGPSIWDTFTHIPGKILNNDTGDVANDFYHRYKEDVNLLKDMNMDAFRFSIAWTRILPNGSLSGGINREGVAFYNSLINDVIAKGMIPFVTIFHWDTP 155          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLB_MICBI (Thermostable beta-glucosidase B OS=Microbispora bispora GN=bglB PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.471e-35
Identity = 67/125 (53.60%), Postives = 91/125 (72.80%), Query Frame = 1
Query:  166 SLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            S P+GF++G AT+AYQ+EG   +DGRG  +WDVF+  PG VA+  TGD++ D YHRY +DV +MA L    YRFS++W RI P G+G VN  G+ +Y++L++ LL  GITPY  LYH+DLP+ LE
Sbjct:   37 SFPDGFIWGAATAAYQIEGAWREDGRG--LWDVFSHTPGKVASGHTGDIACDHYHRYADDVRLMAGLGDRVYRFSVAWPRIVPDGSGPVNPAGLDFYDRLVDELLGHGITPYPTLYHWDLPQTLE 159          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLA_THENN (Beta-glucosidase A OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=bglA PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 6.471e-35
Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +  P GF++G AT++YQ+EG    DG G SIW  F+  PG V N  TGDV+ D Y+R+KED++I+  +   AYRFSISW RI P GTGKVN KG+ +YN++I+ LL++ ITP+  +YH+DLP +L+
Sbjct:    2 KKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDIEIIEKIGAKAYRFSISWPRILPEGTGKVNQKGLDFYNRIIDTLLEKNITPFITIYHWDLPFSLQ 127          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLA_THENE (Beta-glucosidase A (Fragment) OS=Thermotoga neapolitana GN=bglA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.471e-35
Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  163 ESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +  P GF++G AT++YQ+EG    DG G SIW  F+  PG V N  TGDV+ D Y+R+KED++I+  +   AYRFSISW RI P GTGKVN KG+ +YN++I+ LL++ ITP+  +YH+DLP +L+
Sbjct:    2 KKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKEDIEIIEKIGAKAYRFSISWPRILPEGTGKVNQKGLDFYNRIIDTLLEKNITPFITIYHWDLPFSLQ 127          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLA_BACCI (Beta-glucosidase OS=Bacillus circulans GN=bglA PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 6.471e-35
Identity = 66/129 (51.16%), Postives = 90/129 (69.77%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +S    P+ F +G AT+AYQ+EG  ++DGRG SIWD FA  PG V N   G+V+ D YHR +EDV ++ +L    YRFSISW R+ P GTG+VN  G+ YY++L++ LL  GI P+  LYH+DLP+AL+
Sbjct:    1 MSIHMFPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVKNGDNGNVACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQ 129          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.451e-35
Identity = 65/130 (50.00%), Postives = 93/130 (71.54%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +R S P  F+FGT ++AYQ EG   + G+GPS+WD F   PG + NN  GDV+ D YHRYKEDV ++ ++N DA+RFSI+W+RI P G  +G +N +GVA+YN LIN ++ +G+ P+  ++H+D P ALE
Sbjct:   28 TRYSFPKDFIFGTGSAAYQYEGAYKEGGKGPSVWDNFTHIPGKILNNDNGDVANDFYHRYKEDVSLLKDMNMDAFRFSIAWTRILPNGSLSGGINKEGVAFYNSLINDVIAKGMIPFVTIFHWDTPLALE 157          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL28_ORYSJ2.905e-3549.62Beta-glucosidase 28 OS=Oryza sativa subsp. japonic... [more]
BGL22_ORYSJ2.905e-3545.14Beta-glucosidase 22 OS=Oryza sativa subsp. japonic... [more]
BGL1A_PHACH2.905e-3551.91Beta-glucosidase 1A OS=Phanerochaete chrysosporium... [more]
BGLA_PAEPO3.793e-3552.85Beta-glucosidase A OS=Paenibacillus polymyxa GN=bg... [more]
BGL35_ORYSJ3.793e-3551.59Putative beta-glucosidase 35 OS=Oryza sativa subsp... [more]
BGLB_MICBI6.471e-3553.60Thermostable beta-glucosidase B OS=Microbispora bi... [more]
BGLA_THENN6.471e-3551.59Beta-glucosidase A OS=Thermotoga neapolitana (stra... [more]
BGLA_THENE6.471e-3551.59Beta-glucosidase A (Fragment) OS=Thermotoga neapol... [more]
BGLA_BACCI6.471e-3551.16Beta-glucosidase OS=Bacillus circulans GN=bglA PE=... [more]
BGL30_ORYSJ8.451e-3550.00Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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