CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL18_ORYSJ (Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 5.127e-32
Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            + R   P  F+FGTATS+YQ+EG   +  +  S WDVF   PG + + + GD++ D YHRY+EDV++M +L  +AYRFSISWSRI P G  G VN  G+ +YN+LI+ +L +GI P+  L HYD+P+ LE
Sbjct:   27 IHRSDFPASFLFGTATSSYQIEGAYLEGNKSLSNWDVFTHLPGNIKDGSNGDIADDHYHRYEEDVELMNSLGVNAYRFSISWSRILPKGRFGGVNPAGIDFYNKLIDSILLKGIQPFVTLTHYDIPQELE 156          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL31_ARATH (Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGLU31 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.696e-32
Identity = 71/162 (43.83%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   61 LLGTVTIRCAAGTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            L+  V   C A      + AQ  ++ F T  L+R S P  F FG A+SAYQ EG   + GR  SIWD F        N   GDV+VD YHRYKED+ ++  +N D++RFS+SWSRI P G  +  VN +GV +Y  LI+ L++ GI P+  +YH+D+P+AL+
Sbjct:    5 LIALVITLCVASW----DVAQGRSLRFSTTPLNRYSFPPHFDFGVASSAYQYEGAVEEGGRSLSIWDNFTHAFPERTNMDNGDVAVDFYHRYKEDIKLIKEMNMDSFRFSLSWSRILPSGKLSDGVNKEGVQFYKNLIDELIENGIKPFVTIYHWDIPQALD 162          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL07_ARATH (Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU7 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 8.745e-32
Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +R   PN F+FG ATSAYQ EG   +DG+ PS+WD  +      + +  GD++ D YH+YKEDV +MA +  +++RFSISWSR+ P G G++N KG+ +Y  LI  L   GI P   LYHYDLP++LE
Sbjct:   24 TRNDFPNDFLFGAATSAYQWEGAFDEDGKSPSVWDTTSHCD---SGSNNGDIACDGYHKYKEDVMLMAEMGLESFRFSISWSRLIPNGRGRINPKGLLFYKNLIKELRSHGIEPQVTLYHYDLPQSLE 148          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL03_ARATH (Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 8.745e-32
Identity = 63/127 (49.61%), Postives = 81/127 (63.78%), Query Frame = 1
Query:  160 RESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +   P GF+FG+ATSAYQ EG   +DGR PS+WD F        N + GD++ D YH+YKEDV +M     DA+RFSISWSR+ P G G VN KG+ +Y   I  L+  GI P+  L+HYD P+ LE
Sbjct:   24 KNDFPEGFIFGSATSAYQWEGAFDEDGRKPSVWDTFLH----TRNLSNGDITSDGYHKYKEDVKLMVETGLDAFRFSISWSRLIPNGRGPVNPKGLQFYKNFIQELVSHGIEPHVTLFHYDHPQYLE 146          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL1B_PHACH (Beta-glucosidase 1B OS=Phanerochaete chrysosporium GN=BGL1B PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.948e-31
Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  169 LPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            LP  F++G AT+++Q+EG    DGRG SIWD F+K PG   +   GDV+ D Y+R++EDVD++      +YRFSISWSRI P G     VN  G+ +Y+ LI+ LL+RGI P+  LYH+DLP+AL
Sbjct:   11 LPADFLWGFATASFQIEGATDVDGRGKSIWDDFSKIPGKTLDGKNGDVATDSYNRWREDVDLLVQYGVKSYRFSISWSRIIPLGGRNDPVNEAGIKFYSDLIDALLERGIVPFVTLYHWDLPQAL 135          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL47_ARATH (Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGLU47 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 4.340e-31
Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 1
Query:   70 TVTIRCAAGTSYFDEAAQPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            T  +  ++ T ++D+    + +H +         P  F+FGTA+SAYQ EG    DG+  S WDVF    G +A+ + G V+VD YHRY  D+D+M +L  ++YR S+SW+RI P G  G VN  G+ +YN++IN +LK GI P+  L HYD+P+ LE
Sbjct:   30 TTLVSLSSSTRWYDDHISLKEIHAE----ETFHFPKNFLFGTASSAYQYEGAYLTDGKTLSNWDVFTNISGKIADGSHGKVAVDHYHRYPGDLDLMEDLGVNSYRLSLSWARILPKGRFGDVNMGGIDHYNRMINDILKTGIEPFVTLTHYDIPQELE 183          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL18_ARATH (Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 4.340e-31
Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            SR + P GF++GTAT+A+QVEG  ++  RGPS+WD F KK      N   DV+VD YHRYKED+ +M +LN DA+R SI+W RIFP+G  +  ++  GV +Y+ LI+ LLK  I P   ++H+D P+ LE
Sbjct:   40 SRLNFPEGFIWGTATAAFQVEGAVNEGCRGPSMWDTFTKKFPHRCENHNADVAVDFYHRYKEDIQLMKDLNTDAFRLSIAWPRIFPHGRMSKGISKVGVQFYHDLIDELLKNNIIPLVTVFHWDTPQDLE 169          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL14_ORYSJ (Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 9.669e-31
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            + R   P  F+FGT++SAYQVEG   +  +G S WDVF  K G + + + GD + D YHRY ED+++M +L  ++YRFSISW+RI P G  G VN  GVA+YN LI+ L+++GI P+  + HYD+P  L+
Sbjct:   24 VDRSQFPPDFLFGTSSSAYQVEGGYLEGNKGLSNWDVFTHKQGTIEDGSNGDTANDHYHRYMEDIELMHSLGVNSYRFSISWARILPKGRFGDVNPDGVAFYNALIDGLVQKGIQPFVTICHYDIPHELD 153          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLC_MAIZE (Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.263e-30
Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 1
Query:  160 RESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            R+  P+ F FG ATSAYQ+EG  ++DG+G S WD F    P  + + +  D+  + YH YK DV ++  +  DAYRFSISW RI P GT  G +N  G+ YY  LIN LL+ GI PY  ++H+D+P+ALE
Sbjct:   75 RDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALE 204          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLS_AGRSA (Beta-glucosidase OS=Agrobacterium sp. (strain ATCC 21400) GN=abg PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.154e-30
Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = 1
Query:  172 PNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEAL 537
            P  F+FG AT+++Q+EG    DGR PSIWD F   PG V     GD++ D Y+R++ED+D++  +  +AYRFS++W RI P G G +N KG+ +Y++L++    RGI  YA LYH+DLP  L
Sbjct:   12 PGDFLFGVATASFQIEGSTKADGRKPSIWDAFCNMPGHVFGRHNGDIACDHYNRWEEDLDLIKEMGVEAYRFSLAWPRIIPDGFGPINEKGLDFYDRLVDGCKARGIKTYATLYHWDLPLTL 133          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL18_ORYSJ5.127e-3249.23Beta-glucosidase 18 OS=Oryza sativa subsp. japonic... [more]
BGL31_ARATH6.696e-3243.83Beta-glucosidase 31 OS=Arabidopsis thaliana GN=BGL... [more]
BGL07_ARATH8.745e-3248.44Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL03_ARATH8.745e-3249.61Beta-glucosidase 3 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL1B_PHACH1.948e-3150.40Beta-glucosidase 1B OS=Phanerochaete chrysosporium... [more]
BGL47_ARATH4.340e-3141.77Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGL... [more]
BGL18_ARATH4.340e-3149.23Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGL... [more]
BGL14_ORYSJ9.669e-3147.69Probable inactive beta-glucosidase 14 OS=Oryza sat... [more]
BGLC_MAIZE1.263e-3047.69Beta-glucosidase, chloroplastic OS=Zea mays GN=GLU... [more]
BGLS_AGRSA2.154e-3046.72Beta-glucosidase OS=Agrobacterium sp. (strain ATCC... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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