CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL17_ORYSJ (Putative beta-glucosidase 17 OS=Oryza sativa subsp. japonica GN=BGLU17 PE=2 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 2.154e-30
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 1
Query:  151 GLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDV-FAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            GL R+  P GF+FG ATSAYQV         G  +W + F   PG +++   GDV+ D YHRY EDV+I+ NL  ++YRFSISW+RI P   G VN  G+A+YN+LI+ LL++GI P+  L H+D+P+ LE
Sbjct:   27 GLRRDDFPVGFLFGAATSAYQVGWSIMGCSHGGWVWSLPFLVDPGRISDRRNGDVADDHYHRYTEDVEILHNLGVNSYRFSISWARILPSRFGGVNSAGIAFYNRLIDALLQKGIQPFVTLNHFDIPQELE 157          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL29_ARATH (Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 3.674e-30
Identity = 65/131 (49.62%), Postives = 85/131 (64.89%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGK--VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            L R S P+ FVFGTA SA+Q EG   + G+ P+IWD F+       N    DV+VD YHRYK+D+ ++  LN DA+RFSISW+R+ P G  K  VN +GV +Y  LI+ L+  GI P   LYH+D P+ALE
Sbjct:   29 LDRSSFPDDFVFGTAISAFQSEGATSEGGKSPTIWDYFSHTFPERTNMQNADVAVDFYHRYKDDIKLIEELNVDAFRFSISWARLIPSGKVKDGVNKEGVQFYKALIDELIANGIQPSVTLYHWDHPQALE 159          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL27_ARATH (Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGLU27 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 6.267e-30
Identity = 63/142 (44.37%), Postives = 90/142 (63.38%), Query Frame = 1
Query:  121 QPETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            Q + ++       R   P GF+FGTA+SAYQ EG  ++  RG S+WD F +K       +  D +++ Y+ YK+D+  M ++N DA+RFSISW RIFP G  +  VN +G+ +YN LI+ LL  GITP A L+H+D P+ALE
Sbjct:    3 QRKNMYSKKNSFGRSDFPEGFLFGTASSAYQYEGARNEAPRGESVWDTFVRKYPERNCYSNADQAIEFYNHYKDDIQRMKDINMDAFRFSISWPRIFPLGKKSKGVNKEGIQFYNDLIDELLANGITPLATLFHWDTPQALE 144          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL01_ARATH (Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.267e-30
Identity = 61/128 (47.66%), Postives = 76/128 (59.38%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            SR   P GFVFG   SAYQ EG   +DGR PS+WD F            GD++ D YH+YKEDV +MA      +RFSISWSR+   G G +N KG+ +Y   I  L+K GI P+  L+HYD P+ LE
Sbjct:   30 SRSDFPEGFVFGAGISAYQWEGAVDEDGRKPSVWDTFLH----CRKMDNGDIACDGYHKYKEDVQLMAETGLHTFRFSISWSRLISNGRGSINPKGLQFYKNFIQELVKHGIEPHVTLHHYDFPQYLE 153          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LPH_HUMAN (Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.069e-29
Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 1
Query:  181 FVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGI-VANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            F++G ++SAYQ+EG    DG+GPSIWD F   PG  V +NATGD++ D YH+   D++++  L   AYRFSISWSRIFP G    +N  GV YYN+LIN L+   I P   L+H+DLP+AL+
Sbjct:  907 FLWGVSSSAYQIEGAWDADGKGPSIWDNFTHTPGSNVKDNATGDIACDSYHQLDADLNMLRALKVKAYRFSISWSRIFPTGRNSSINSHGVDYYNRLINGLVASNIFPMVTLFHWDLPQALQ 1028          

HSP 2 Score: 124.79 bits (312), Expect = 2.633e-28
Identity = 60/124 (48.39%), Postives = 81/124 (65.32%), Query Frame = 1
Query:  172 PNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGK-VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            P GF++  A++AYQ+EG    DG+G SIWD F+  P  V N+A GDV+ D YH+  ED+  + NL    YRFSISWSRI P GT + +N  G+ YY +LI+ LL   I P   +YH+DLP+ L+
Sbjct: 1378 PEGFIWSAASAAYQIEGAWRADGKGLSIWDTFSHTPLRVENDAIGDVACDSYHKIAEDLVTLQNLGVSHYRFSISWSRILPDGTTRYINEAGLNYYVRLIDTLLAASIQPQVTIYHWDLPQTLQ 1501          

HSP 3 Score: 113.62 bits (283), Expect = 6.070e-25
Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  160 RESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKP-GIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTG-KVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +++ P GF++G +T A+ VEG   + GRG SIWD   ++P       AT +V+ D YH+   DV ++  L    Y+FSISWSRIFP G G   +  GVAYYN+LI+ L   GI P A L+H+DLP+AL+
Sbjct:  379 QDTFPEGFLWGASTGAFNVEGGWAEGGRGVSIWD--PRRPLNTTEGQATLEVASDSYHKVASDVALLCGLRAQVYKFSISWSRIFPMGHGSSPSLPGVAYYNKLIDRLQDAGIEPMATLFHWDLPQALQ 505          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LPH_RAT (Lactase-phlorizin hydrolase OS=Rattus norvegicus GN=Lct PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.396e-29
Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 1
Query:  172 PNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGK-VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            P GF++  A+++YQVEG    DG+G SIWD F+  P  + N+  GDV+ D YH+  EDV  + NL    YRFSI+WSRI P GT K +N  G++YY + I+ LL  GITP   +YH+DLP+AL+
Sbjct: 1379 PKGFIWSAASASYQVEGAWRADGKGLSIWDTFSHTPLRIGNDDNGDVACDSYHKIAEDVVALQNLGVSHYRFSIAWSRILPDGTTKFINEAGLSYYVRFIDALLAAGITPQVTIYHWDLPQALQ 1502          

HSP 2 Score: 127.487 bits (319), Expect = 4.062e-29
Identity = 62/122 (50.82%), Postives = 85/122 (69.67%), Query Frame = 1
Query:  181 FVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGI-VANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            F++G ++S YQ+EG  + DG+GPSIWD F   PG  V +NATGDV+ D YH+   D++I+  L   +YRFSISWSRIFP G    +N +GV YYN+LI+ L+   I P   L+H+DLP+AL+
Sbjct:  909 FLWGVSSSPYQIEGGWNADGKGPSIWDNFTHTPGNGVKDNATGDVACDSYHQLDADLNILRTLKVKSYRFSISWSRIFPTGRNSTINKQGVDYYNRLIDSLVDNNIFPMVTLFHWDLPQALQ 1030          

HSP 3 Score: 110.538 bits (275), Expect = 5.139e-24
Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  160 RESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKV-NWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            ++  P GF++G +T A+ VEG   + GRGPSIWD +          AT  V+ D YH+   DV ++  +    Y+FSISWS +FP G     N +GVAYYN+LI+ LL   I P A L+H+DLP+AL+
Sbjct:  381 QDVFPEGFLWGISTGAFNVEGGWAEGGRGPSIWDHYGNL-NAAEGQATAKVASDSYHKPASDVALLRGIRAQVYKFSISWSGLFPLGQKSTPNRQGVAYYNKLIDRLLDSHIEPMATLFHWDLPQALQ 507          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL28_ARATH (Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.823e-29
Identity = 64/135 (47.41%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  142 DTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGK--VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            D+    R   P+ FVFGTA SA+Q EG   + G+ PSIWD F+            DV+VD YHRYK+D+ +M  LN DA+RFSISW+R+ P G  K  VN +GV +Y  LI+ L+  GI P   LYH+D P++LE
Sbjct:   25 DSRVFDRHGFPDNFVFGTAASAFQYEGATSEGGKSPSIWDYFSHTFPERTRMQNADVAVDFYHRYKDDIKLMKELNMDAFRFSISWARLIPSGKVKDGVNKEGVEFYKALIDELVANGIEPSMTLYHWDHPQSLE 159          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL26_ARATH (Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.823e-29
Identity = 58/130 (44.62%), Postives = 91/130 (70.00%), Query Frame = 1
Query:  160 RESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGK--VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            R S P GF+FGTA+S+YQ EG  ++  RG S+WD F+ + P  +++++ G+V+VD YHRYKED+  M ++N D++R SI+W R+ PYG     V+ +G+ +YN +I+ LL   ITP   ++H+D+P+ LE
Sbjct:   16 RASFPKGFLFGTASSSYQYEGAVNEGARGQSVWDHFSNRFPHRISDSSDGNVAVDFYHRYKEDIKRMKDINMDSFRLSIAWPRVLPYGKRDRGVSEEGIKFYNDVIDELLANEITPLVTIFHWDIPQDLE 145          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL29_ORYSJ (Beta-glucosidase 29 OS=Oryza sativa subsp. japonica GN=BGLU29 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.382e-29
Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 1
Query:  157 SRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT--GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +R S P  F+FGT ++AYQ EG A + G+              + N  TGDV+ D YHRYKEDV+++ ++N DA+RFSISWSRI P GT  G VN +GVA+YN LIN ++ +G+ P+  ++H+D P+ALE
Sbjct:   31 NRYSFPKDFIFGTGSAAYQYEGAAKEGGK--------------ILNGDTGDVADDFYHRYKEDVNLLKDMNMDAFRFSISWSRILPNGTLSGGVNKEGVAFYNNLINEIIAKGMKPFVTIFHWDTPQALE 146          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: GBA3_PONAB (Cytosolic beta-glucosidase OS=Pongo abelii GN=GBA3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.110e-29
Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 1
Query:  166 SLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGI-VANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            + P GF +  AT+AYQVEG    DG+GP +WD F  + G  V  N TGDV+   Y  ++ED+  +  L    YRFS+SWSR+ P GT G +N KG+ YYN++I+ LLK G+TP   LYH+DLP+ALE
Sbjct:    2 AFPVGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQALE 128          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL17_ORYSJ2.154e-3048.85Putative beta-glucosidase 17 OS=Oryza sativa subsp... [more]
BGL29_ARATH3.674e-3049.62Beta-glucosidase 29 OS=Arabidopsis thaliana GN=BGL... [more]
BGL27_ARATH6.267e-3044.37Beta-glucosidase 27 OS=Arabidopsis thaliana GN=BGL... [more]
BGL01_ARATH6.267e-3047.66Beta-glucosidase 1 OS=Arabidopsis thaliana GN=BGLU... [more]
LPH_HUMAN1.069e-2951.64Lactase-phlorizin hydrolase OS=Homo sapiens GN=LCT... [more]
LPH_RAT1.396e-2949.19Lactase-phlorizin hydrolase OS=Rattus norvegicus G... [more]
BGL28_ARATH1.823e-2947.41Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGL... [more]
BGL26_ARATH1.823e-2944.62Beta-glucosidase 26, peroxisomal OS=Arabidopsis th... [more]
BGL29_ORYSJ2.382e-2947.69Beta-glucosidase 29 OS=Oryza sativa subsp. japonic... [more]
GBA3_PONAB3.110e-2949.61Cytosolic beta-glucosidase OS=Pongo abelii GN=GBA3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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