CF503958

Overview
NameCF503958
Unique NameCF503958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL33_ARATH (Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGLU33 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.110e-29
Identity = 66/132 (50.00%), Postives = 83/132 (62.88%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGK--VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            + ++  P  F+FGT+ SAYQVEG     GRG + WD F    P  V  N  GD  VD Y RYK+D+ +M  LN + +RFSISW+RI PYGT K  VN +GV +YN LIN LL  GI P   L+H++ P ALE
Sbjct:   94 IHKQDFPADFIFGTSVSAYQVEGAKKGSGRGLTSWDEFTHMFPEKVQQNGDGDEGVDFYTRYKDDIKLMKELNTNGFRFSISWTRILPYGTIKKGVNEEGVKFYNDLINELLANGIQPSVTLFHWESPLALE 225          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL30_ARATH (Beta-glucosidase 30 OS=Arabidopsis thaliana GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.306e-29
Identity = 63/131 (48.09%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  154 LSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGK--VNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            L R S P+ F+FGTA SA+Q EG   + G+ P+IWD F+            DV++D YHRYK+D+ +M  LN DA+RFSISWSR+ P G  K  VN +GV +Y  LI+ LL   I P   LYH+D P++LE
Sbjct:   26 LDRHSFPDDFIFGTAASAFQYEGATSEGGKSPTIWDHFSLTYPERTKMHNADVAIDFYHRYKDDIKLMKELNMDAFRFSISWSRLIPSGKLKDGVNKEGVQFYKDLIDELLANDIQPSMTLYHWDHPQSLE 156          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: GBA3_HUMAN (Cytosolic beta-glucosidase OS=Homo sapiens GN=GBA3 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 6.929e-29
Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 1
Query:  166 SLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGI-VANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            + P GF +  AT+AYQVEG    DG+GP +WD F  + G  V  N TGDV+   Y  ++ED+  +  L    YRFS+SWSR+ P GT G +N KG+ YYN++I+ LLK G+TP   LYH+DLP+ LE
Sbjct:    2 AFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLE 128          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL34_ARATH (Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.929e-29
Identity = 65/147 (44.22%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  112 EAAQPETVHFD-TGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            E    E  H D T   +R   P  F FG ATSAYQ+EG AH+   G   WD F  + P  V + ++GD++ D Y  YK+DV ++  +N  AYR SI+WSR+ P G  TG V+  G+ YYN LIN L   GI PY  ++H+D+P+ LE
Sbjct:   30 ECKAKEPFHCDNTHAFNRTGFPRNFTFGAATSAYQIEGAAHRALNG---WDYFTHRYPEKVPDRSSGDLACDSYDLYKDDVKLLKRMNVQAYRLSIAWSRVLPKGRLTGGVDENGITYYNNLINELKANGIEPYVTIFHWDVPQTLE 173          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LPH_RABIT (Lactase-phlorizin hydrolase OS=Oryctolagus cuniculus GN=LCT PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.050e-29
Identity = 61/122 (50.00%), Postives = 85/122 (69.67%), Query Frame = 1
Query:  181 FVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGI-VANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            F++G ++SAYQ+EG    DG+GPSIWD F   PG  V +N+TGD++ D Y++   D++++  L   AYRFS+SWSRIFP GT   +N  GV YYN+LI+ LL   I P   L+H+DLP+AL+
Sbjct:  905 FLWGVSSSAYQIEGAWDADGKGPSIWDNFTHTPGNGVTDNSTGDIACDSYNQLDADLNVLRALKVKAYRFSLSWSRIFPTGTNSSINSHGVDYYNRLIDGLLASDIFPMVTLFHWDLPQALQ 1026          

HSP 2 Score: 117.087 bits (292), Expect = 5.490e-26
Identity = 58/128 (45.31%), Postives = 83/128 (64.84%), Query Frame = 1
Query:  160 RESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTG-KVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            +++ P GF++G +T A+ VEG   + GRGPS+WD F          AT +V+ D Y+++  DV ++  L    Y+FSISWSRIFP G G   + +GVAYYN+LI+ LL   I P A L+H+DLP+AL+
Sbjct:  377 QDTFPQGFLWGVSTGAFNVEGGWAEGGRGPSVWDQFGHLKA-AQGQATPEVASDSYYKWASDVALLRGLRAQVYKFSISWSRIFPMGRGSSPSPQGVAYYNKLIDSLLDSHIEPMATLFHWDLPQALQ 503          

HSP 3 Score: 117.087 bits (292), Expect = 5.490e-26
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 1
Query:  172 PNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG-TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            P GFV+ T+T+A+Q+EG    DG+G  IWD F      + N+   DV+ D YH+  EDV  + NL    YRFSISWSRI P G T  +N  G+ YY +LI+ LL   I P   +YH+DLP+AL+
Sbjct: 1376 PEGFVWSTSTAAFQIEGAWRADGKGLGIWDTFTHTRLKIENDDIADVACDSYHKISEDVVALQNLAVTHYRFSISWSRILPDGTTNYINEAGLNYYVRLIDALLAANIKPQVTMYHFDLPQALQ 1499          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL35_ARATH (Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.633e-28
Identity = 64/147 (43.54%), Postives = 86/147 (58.50%), Query Frame = 1
Query:  112 EAAQPETVHFD-TGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            E    E  H D T   +R   P  F FG ATSAYQ+EG AH+   G   WD F  + P  V + ++ D++ D Y  YK+DV ++  +N  AYR SI+WSR+ P G  TG V+  G+ YYN LIN L   GI PY  ++H+D+P+ LE
Sbjct:   30 ECKAKEPFHCDNTHAFNRSGFPKNFTFGAATSAYQIEGAAHRALNG---WDYFTHRYPEKVPDRSSADLACDSYDLYKDDVKLLKRMNVQAYRLSIAWSRVLPKGRLTGGVDENGITYYNNLINELKANGIEPYVTIFHWDVPQTLE 173          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: GBA3_CAVPO (Cytosolic beta-glucosidase OS=Cavia porcellus GN=Gba3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.439e-28
Identity = 64/127 (50.39%), Postives = 81/127 (63.78%), Query Frame = 1
Query:  166 SLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGI-VANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            + P   V G  T+AYQVEG    DGRGP +WD F  + G  V  N TGDV+   Y  ++ED+  +  L    YRFSISWSR+ P GT G +N KGV YYN++I+ LL  G+TP   LYH+DLP+ALE
Sbjct:    2 AFPADLVGGLPTAAYQVEGGWDADGRGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSISWSRLLPDGTTGFINQKGVDYYNKIIDDLLTNGVTPVVTLYHFDLPQALE 128          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGL45_ARATH (Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGLU45 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.661e-28
Identity = 60/125 (48.00%), Postives = 83/125 (66.40%), Query Frame = 1
Query:  172 PNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFA-KKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            P+ F+FGTA+SAYQ EG    DG+  + WDVF  K PG + +    D +VDQY+R+ ED+ +M+ L  ++YRFSISW RI P G  G++N+ G+ YYN  I+ L+ RGI P+  L H D P+ LE
Sbjct:   39 PSDFLFGTASSAYQYEGAFLTDGKSLNNWDVFTHKNPGKILDKNNADRAVDQYNRFLEDIQLMSFLGVNSYRFSISWCRILPRGRFGEINYLGIKYYNIFIDALISRGIKPFVTLNHVDYPQELE 163          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: LCTL_HUMAN (Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 8.470e-27
Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 1
Query:  124 PETVHFDTGGLSRESLPNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKK-PGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYG--TGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            PE   F  G     + P GF +G  +SAYQ EG   +DG+GPSIWDVF     G V  N T DV+ D Y++ +ED+ ++  L+ + YRFS+SW R+ P G    +VN KG+ +Y+ LI+ LL   ITP   L+H+DLP+ L+
Sbjct:   27 PEEASFYYG-----TFPLGFSWGVGSSAYQTEGAWDQDGKGPSIWDVFTHSGKGKVLGNETADVACDGYYKVQEDIILLRELHVNHYRFSLSWPRLLPTGIRAEQVNKKGIEFYSDLIDALLSSNITPIVTLHHWDLPQLLQ 163          
BLAST of CF503958 vs. ExPASy Swiss-Prot
Match: BGLB_PAEPO (Beta-glucosidase B OS=Paenibacillus polymyxa GN=bglB PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.470e-27
Identity = 55/123 (44.72%), Postives = 79/123 (64.23%), Query Frame = 1
Query:  172 PNGFVFGTATSAYQVEGMAHKDGRGPSIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALE 540
            P  F++GT+TS+YQ+EG   + GR PSIWD F + PG V     GDV+ D +H +KEDV +M  L F  YRFS++W RI P   G +N +G+ +Y  L++ +   G+ P   LYH+DLP+ +E
Sbjct:    9 PATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIE 130          
The following BLAST results are available for this feature:
BLAST of CF503958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL33_ARATH3.110e-2950.00Beta-glucosidase 33 OS=Arabidopsis thaliana GN=BGL... [more]
BGL30_ARATH5.306e-2948.09Beta-glucosidase 30 OS=Arabidopsis thaliana GN=BGL... [more]
GBA3_HUMAN6.929e-2948.82Cytosolic beta-glucosidase OS=Homo sapiens GN=GBA3... [more]
BGL34_ARATH6.929e-2944.22Myrosinase 4 OS=Arabidopsis thaliana GN=TGG4 PE=1 ... [more]
LPH_RABIT9.050e-2950.00Lactase-phlorizin hydrolase OS=Oryctolagus cunicul... [more]
BGL35_ARATH2.633e-2843.54Myrosinase 5 OS=Arabidopsis thaliana GN=TGG5 PE=1 ... [more]
GBA3_CAVPO3.439e-2850.39Cytosolic beta-glucosidase OS=Cavia porcellus GN=G... [more]
BGL45_ARATH7.661e-2848.00Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGL... [more]
LCTL_HUMAN8.470e-2743.66Lactase-like protein OS=Homo sapiens GN=LCTL PE=1 ... [more]
BGLB_PAEPO8.470e-2744.72Beta-glucosidase B OS=Paenibacillus polymyxa GN=bg... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-446 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503958 ID=CF503958; Name=CF503958; organism=Citrus sinensis; type=EST; length=541bp
TTTCTTTCTTTGAAGATGAGAGTCCCGCTTGCAGTTGCAGCCTCCTTCTA
CTTCTCCCTCTTGCTCGGCACTGTTACAATCCGGTGTGCTGCTGGTACAT
CTTACTTCGATGAAGCCGCACAGCCTGAAACTGTCCATTTCGACACCGGC
GGGCTGAGCAGAGAAAGCCTCCCGAACGGCTTTGTGTTTGGAACGGCCAC
GTCCGCTTATCAAGTGGAAGGCATGGCCCACAAAGACGGTCGTGGGCCCA
GCATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGCCAATAATGCC
ACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAGAGGATGTTGA
TATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCAATTTCCTGGT
CCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAAGGGAGTTGCA
TACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTATTACTCCATA
TGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAGA
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