CF503966

Overview
NameCF503966
Unique NameCF503966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig511 contig Csv1_Contig511:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 1
Query:  322 LIVGIAVPLGILGLIAISIVFYMRRKK--DNDDEEVLVGIDS--KPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 675
            +I+G A  L ++ L+ + +    +++K  +N  E  L  +DS  K   F   EL  AT  F+ +N +G      VYKG L DG VIAVK L++   S +    F  E  T+S ++HRNLV++ G
Sbjct:  810 IILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSLPDLDSALKLKRFEPKELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYTEAKTLSQLKHRNLVKILG 933          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11
Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = 1
Query:  451 TFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSD----------GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            +F++AEL++AT++F P + LGEGG+G V+KG + +          G VIAVK+L+    QG  +++ E+  +    H NLV+L G C+E
Sbjct:   56 SFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLE 144          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11
Identity = 52/144 (36.11%), Postives = 71/144 (49.31%), Query Frame = 1
Query:  274 VSGLPPSTAGNKNHTGL-IVGIAVPLGILG-LIAISIVFYMRRK-------KDNDDEEVLVGID-SKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 675
            V   P  + G      L I  IA    I+  LIA+ I+F+  RK             EV + +D   P TF    +  AT +F+ SN +G GG+G  YK  +S   V+A+K+LSI   QG  QF  EI T+  ++H NLV L G
Sbjct:  794 VENAPSQSPGKGGFNSLEIASIASASAIVSVLIALVILFFYTRKWHPKSKIMATTKREVTMFMDIGVPITFD--NVVRATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGVQQFHAEIKTLGRLRHPNLVTLIG 935          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11
Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  283 LPPSTAGNKNHTG--------LIVGIAVPLGILGLIAISIVFYMRRKKD---ND-DEEVLVGID-----SKPNTF--------SYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            L P  +  +N+ G        +++ I++ +GI  L+++ ++   R+  D   ND DEE + G+      SK   F        S  EL  +T +F  +N +G GG+G VYK    DG   AVK+LS    Q + +F  E+  +S  +H+NLV L G C  G
Sbjct:  660 LNPKGSSRRNNNGGKFGRSSIVVLTISLAIGITLLLSVILLRISRKDVDDRINDVDEETISGVSKALGPSKIVLFHSCGCKDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHG 820          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11
Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = 1
Query:  316 TGLIVGIAVPLGILGLIAI-SIVFY-MRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQ-FVNEIATISAVQHRNLVRLYG 675
            T  IV IAV   +L L+ + ++VF  +RR+K   +++  V    +  +    ++ +AT + +    +G G +G VY+ +L  G+V AVK+L  ASH   NQ  + EI TI  V+HRNL++L G
Sbjct:  767 TWQIVLIAVLSSLLVLVVVLALVFICLRRRKGRPEKDAYVFTQEEGPSLLLNKVLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEG 889          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  454 FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSD----------GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            FS +EL+SAT++F P + +GEGG+G V+KG + +          G VIAVK+L+    QG  +++ EI  +  + H NLV+L G C+E
Sbjct:   56 FSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLE 143          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 1
Query:  301 GNKNHTGLIVGIAVPLG--ILGLIAISIVFYMRRKKDNDDE---EVLVGIDS---------KPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGPGASL 705
            G +    + + I   +G  +   +A+ I   +R+   ++DE     ++  DS         K   F+YAE+ + T +F     LG+GG+G VY G+++    +AVK LS +S QG  QF  E+  +  V H+NLV L G C EG   +L
Sbjct:  502 GGRQIKSMTIPIVASIGSVVAFTVALMIFCVVRKNNPSNDEAPTSCMLPADSRSSEPTIVTKNKKFTYAEVLTMTNNFQKI--LGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLAL 648          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11
Identity = 35/89 (39.33%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  451 TFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSD----------GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            +F++ EL+ AT++F P + +GEGG+G V+KG L +          G VIAVK+L+    QG  +++ EI  +  + H NLV+L G C+E
Sbjct:   54 SFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLE 142          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1
Query:  439 SKPN--TFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSD----------GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            S PN   F++ EL++AT++F   N LGEGG+G V+KG +            G V+AVKQL     QG  +++ E+  +  + H NLV L G C EG
Sbjct:   67 SSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEG 162          
The following BLAST results are available for this feature:
BLAST of CF503966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
FLS2_ARATH3.855e-1135.48LRR receptor-like serine/threonine-protein kinase ... [more]
APK1B_ARATH3.855e-1139.33Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
RPK2_ARATH5.034e-1136.11LRR receptor-like serine/threonine-protein kinase ... [more]
PSKR2_ARATH5.034e-1131.68Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PEPR1_ARATH5.034e-1135.77Leucine-rich repeat receptor-like protein kinase P... [more]
NAK_ARATH6.575e-1140.91Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y5181_ARATH8.587e-1131.54Probable LRR receptor-like serine/threonine-protei... [more]
BIK1_ARATH8.587e-1139.33Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK2A_ARATH8.587e-1139.58Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-454 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503966 ID=CF503966; Name=CF503966; organism=Citrus sinensis; type=EST; length=706bp
CTTGATCGAAGCACAGAAAGGTGGGAGAGTCTTGCAAGGCGTGTTTTTGA
TATCTACATTCAGGGAACTCTCCGGTGGAAGGATTTTGACATATCAAAGG
AGGCGGGAGGGCCTAACAGAGCTATTATAAAGAATTTCAATGCCACTGTG
TCAGAAAACCATCTTGAAATTCACCTATTTTGGGCTGGTAAAGGGACCTG
CTGCGTACCTAAACAAGGTGATTATGGACCAGCAATTTCAGCTCTCAGTG
TCGTTTCAGCTTTCAAACCATCTGTAAGTGGATTACCCCCAAGTACTGCA
GGGAATAAGAACCACACAGGGTTGATTGTTGGTATTGCAGTTCCTCTTGG
AATTTTGGGCTTGATAGCGATATCTATAGTGTTCTACATGCGGAGAAAAA
AAGACAACGATGATGAGGAAGTGCTAGTTGGGATAGACTCTAAACCAAAC
ACTTTCAGCTATGCTGAGTTGAGATCTGCAACACAAGACTTTGACCCTTC
AAACAAGCTTGGAGAGGGAGGATATGGACCTGTGTACAAGGGTACTCTAT
CTGATGGGAGAGTAATAGCTGTGAAGCAACTTTCAATAGCATCTCACCAA
GGGAAGAATCAATTTGTAAATGAGATTGCTACCATATCTGCAGTGCAACA
TCGCAATCTTGTGAGATTGTATGGATGCTGCATTGAAGGACCAGGCGCCT
CCTTGT
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