CF503966

Overview
NameCF503966
Unique NameCF503966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  286 PP--STAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRKKD---NDDEEVLVGIDSKPNT-----FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            PP  S  G   ++ +I+ + VP  I+ L+ + + F+  R K    N + E L        T     F +  + +AT  F  +NKLG+GG+G VYKG    G  +AVK+LS  S QG+ +F NE+  ++ +QHRNLVRL G C+E
Sbjct:  275 PPLISERGKGRNSSVIIVVVVP--IIALLLLFVAFFSLRAKKTRTNYEREPLTEESDDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLE 416          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  298 AGNKNHTGLIVGIAVPLGILGLI----------------AISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELR----------SATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            A  +N +G I+ + V + +L L+                AISI    R +    +E VL         + + EL            AT++F   NKLG+GG+G VYKG L DG+ IAVK+LS  S QG ++F+NE+  I+ +QH NLV++ GCCIEG
Sbjct:  438 AKKRNASGKIISLTVGVSVLLLLIMFCLWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREFSGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEG 594          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 52/133 (39.10%), Postives = 78/133 (58.65%), Query Frame = 1
Query:  307 KNHTGLIVGIAVPLGILGLI-----AISIVFYMRRKKDNDDEEVLVGIDSKP-NTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            K  T  I  I VP+ ++ +I      +S +F  RRK   + +    GI +       +  +  AT++F  +NKLG+GG+G VYKGTL +G  +AVK+LS  S QG  +F NE+  ++ +QHRNLV+L G C+E
Sbjct:  300 KFSTETIAAIVVPIIVVAIIFLVLLVLSRLFARRRKSYQEIDLDQSGITTLHFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLE 432          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 60/150 (40.00%), Postives = 81/150 (54.00%), Query Frame = 1
Query:  268 PSVSGLPPSTAGNKNHTGLIVG-IAVPLGILGLIAISIVFYMRRKKDND---------DEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNLVRLYGCCI 684
            P +S  PPS AG+   TG I G +A    +L  +    + + RRKK  D         D EV +G   +   FS  EL+ A+ +F   N LG GG+G VYKG L+DG ++AVK+L     Q G+ QF  E+  IS   HRNL+RL G C+
Sbjct:  208 PPISPTPPSPAGSNRITGAIAGGVAAGAALLFAVPAIALAWWRRKKPQDHFFDVPAEEDPEVHLG---QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 354          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 1
Query:  409 DDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 681
            + E   +  +S   +F Y+ L+ AT +F+ S KLG GGYG V+KGTLSDGR IA+K+L ++  + +++  NEI  IS  QH+NLVRL GCC
Sbjct:  304 EKESESICTESHLMSFEYSTLKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCC 394          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 64/185 (34.59%), Postives = 93/185 (50.27%), Query Frame = 1
Query:  229 PAISALSVVS------AFKPS-----VSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISI--VFYMRRKK-------------DNDDEEVLVGIDSKPNT-----FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            P I+ LS VS        KP      +  +  +T    N + +I+ + V +  L L+ +++  V   RRKK             D +  E L        T     F +  + +AT +F P NKLG+GG+G VYKGT   G  +AVK+LS  S QG+ +F NE+  ++ +QHRNLVRL G C+EG
Sbjct:  390 PLITCLSAVSFEKFKDLLKPGFICILIKIVSENTGKGGNSSVIIIAVVVSITALLLLFVAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDSITTAGSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEG 574          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  310 NHTGLIVGIAVPLG-ILGLIAISIV--FYMRRKKDNDDEEVL---------------VGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            NH  L +G+    G ++ ++ I ++  F  +++K N  ++                 VG+  K   FS  EL  AT++F  +  LG+GG G VYKG L DGR++AVK+  +       +F+NE+  +S + HRN+V+L GCC+E
Sbjct:  369 NHRPLAIGLGASFGSLIFVVGIYLLYKFIKKQRKLNQKKKFFKRNGGLLLQQQLISTVGMVEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLE 512          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 55/163 (33.74%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  268 PSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISI----------------VFYMRRKKDNDDEEVLVGIDSKPNT------FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            P  S   P   GN +   +++ + VP+ +L L+ ++                 +F ++RK+    E      D    T      F +  + +AT  F P NKLG+GG+G VYKGT   G  +AVK+LS  S QG+ +F NE+  ++ +QHRNLV+L G C+EG
Sbjct:  250 PQDSSPRPGKGGNSSV--IVIAVVVPITVLFLLFVAFFSVRRAKRKKTIGAIPLFKVKRKETEVTEPPAETTDGDDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEG 410          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17
Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = 1
Query:  292 STAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVG--IDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            S  G K  T  I+GI V L     + + + + + R++    E         S    F +  + +AT +F  SNKLG GG+G V+KGT  +G  +AVK+LS  S QG+ +F NE+  ++ +QHRNLVRL G  +EG
Sbjct:  267 SDDGGKISTRNILGITVALAFFITVLLVLGYALSRRRKAYQEFATENDITTSGSLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEG 401          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17
Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 1
Query:  268 PSVSGLPPSTAGNKNHT--GLIVGIAVPLGI-LGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            PSV+     T  N +    G I  I V + + + LI + +V   RRK+  + E  +V  +++   F    + +AT +F   NKLG GG+G VYKG L +G  IAVK+LS  S QG+ +F NE+  ++ +QH NLVRL G  ++G
Sbjct:  282 PSVTNQTNITKKNDSRISGGTIAAIVVVVVVTIILIVVGLVICKRRKQKQEIELPIVLNEAESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQG 425          
The following BLAST results are available for this feature:
BLAST of CF503966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
CRK4_ARATH3.256e-1837.50Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
SRK6_BRAOE4.252e-1836.94Putative serine/threonine-protein kinase receptor ... [more]
CRK12_ARATH4.252e-1839.10Putative cysteine-rich receptor-like protein kinas... [more]
BAK1_ARATH4.252e-1840.00BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
CRK43_ARATH5.553e-1848.35Putative cysteine-rich receptor-like protein kinas... [more]
CRK23_ARATH5.553e-1834.59Putative cysteine-rich receptor-like protein kinas... [more]
WAKLH_ARATH9.472e-1833.33Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
CRK20_ARATH9.472e-1833.74Putative cysteine-rich receptor-like protein kinas... [more]
CRK16_ARATH1.237e-1737.78Putative cysteine-rich receptor-like protein kinas... [more]
CRK17_ARATH2.756e-1738.19Cysteine-rich receptor-like protein kinase 17 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-454 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503966 ID=CF503966; Name=CF503966; organism=Citrus sinensis; type=EST; length=706bp
CTTGATCGAAGCACAGAAAGGTGGGAGAGTCTTGCAAGGCGTGTTTTTGA
TATCTACATTCAGGGAACTCTCCGGTGGAAGGATTTTGACATATCAAAGG
AGGCGGGAGGGCCTAACAGAGCTATTATAAAGAATTTCAATGCCACTGTG
TCAGAAAACCATCTTGAAATTCACCTATTTTGGGCTGGTAAAGGGACCTG
CTGCGTACCTAAACAAGGTGATTATGGACCAGCAATTTCAGCTCTCAGTG
TCGTTTCAGCTTTCAAACCATCTGTAAGTGGATTACCCCCAAGTACTGCA
GGGAATAAGAACCACACAGGGTTGATTGTTGGTATTGCAGTTCCTCTTGG
AATTTTGGGCTTGATAGCGATATCTATAGTGTTCTACATGCGGAGAAAAA
AAGACAACGATGATGAGGAAGTGCTAGTTGGGATAGACTCTAAACCAAAC
ACTTTCAGCTATGCTGAGTTGAGATCTGCAACACAAGACTTTGACCCTTC
AAACAAGCTTGGAGAGGGAGGATATGGACCTGTGTACAAGGGTACTCTAT
CTGATGGGAGAGTAATAGCTGTGAAGCAACTTTCAATAGCATCTCACCAA
GGGAAGAATCAATTTGTAAATGAGATTGCTACCATATCTGCAGTGCAACA
TCGCAATCTTGTGAGATTGTATGGATGCTGCATTGAAGGACCAGGCGCCT
CCTTGT
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