CF503966

Overview
NameCF503966
Unique NameCF503966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig511 contig Csv1_Contig511:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17
Identity = 54/161 (33.54%), Postives = 87/161 (54.04%), Query Frame = 1
Query:  223 YGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVG-----IAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            +  AI  +++  +  PSV+   P     KN + +  G     + V +  + L+ +  V   RRK+  +     + + ++   F    + SAT +F   NKLG+GG+G VYKG L +G  IAVK+LS  S QG+ +F NE+  ++ +QH NLVRL G  ++G
Sbjct:  250 FSGAIDQINLPKSPPPSVTSPSPIANITKNDSRISGGKIAAIVVVTVVTIILVVLGFVISNRRKQKQE-----MDLPTESVQFDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQG 405          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 1
Query:  226 GPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFY--------MRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 684
            GPA   L   +    + +GL  S   N  H  L++  A  + +  +I++  +F+        + R     D E  +G   +   FS+ E+++AT +F P N LG+GG+G VYKG L +G V+AVK+L    + G+ QF  E+  I    HRNL+RL+G C+
Sbjct:  209 GPASQELCSDATPVRNATGL--SEKDNSKHHSLVLSFAFGIVVAFIISLMFLFFWVLWHRSRLSRSHVQQDYEFEIGHLKR---FSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCM 364          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 1
Query:  415 EEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 678
            EE+LVG+    + FSY EL  AT +FDPS +LG+GG+G VY G L DGR +AVK+L   + +   QF NE+  ++ ++H NLV L+GC
Sbjct:  323 EELLVGV----HIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFGC 406          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  253 VSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGI-LGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSY--AELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            + AF  ++S  PP  +      G  V I V  G+ + +++  +V  + RK+  D  E     +S   +  Y    + +AT  F   N LG+GG+G V+KG L DG  IAVK+LS  S QG  +F NE + ++ +QHRNLV + G C+EG
Sbjct:  246 IGAFNLTLS--PPPGSKRNISVGFFVAIVVATGVVISVLSTLVVVLVCRKRKTDPPE-----ESPKYSLQYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEG 387          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 74/252 (29.37%), Postives = 108/252 (42.86%), Query Frame = 1
Query:   22 WESLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNAT----VSENHLEIHLFWAGKGTCCVPKQG------------DYGPAISALSVVSAFKPSVSGLPPS------TAGNKNHTGLIVGIA-------VPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            WE LARR+       + + K +     A    + I      T    + + H+ +        TCC  KQG            +  P   A S +S   P  S   P+      TA  K    + +GI        V +  L L+A+  V Y RRK        +    S    F +  +  AT  F  SN +G GG+G V+ G L+ G  +A+K+LS AS QG  +F NE+  ++ + HRNLV+L G C+EG
Sbjct:  154 WEELARRMIASTTSPSSKRKYYAADVAALTAFQIIYALMQCTPDLSLEDCHICLRQSVGDYETCCNGKQGGIVYRASCVFRWELFPFSEAFSRISLAPPPQSPAFPTLPAVTNTATKKGSITISIGIVWAIIIPTVIVVFLVLLALGFVVYRRRKSYQGSSTDITITHSLQ--FDFKAIEDATNKFSESNIIGRGGFGEVFMGVLN-GTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEG 402          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 72/235 (30.64%), Postives = 113/235 (48.09%), Query Frame = 1
Query:   22 WESLARRVFD----IYIQGTLRWKDFDISKEAGGPNRA---IIKNFNATVSENHLEIHLFWAGKGTCCVPKQGDY--GPAISALSVVSAFKPSVSGLPPSTAGNKN-HTGLIVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVG--IDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            WE+L  R+ D    +Y    +R  +  IS+  G    +    ++N    + +N +E         +CC  +QG     P+      +  F      + P     K+  TG IV I V + IL L+A+ +  + RRK        +      S    F +  + +AT +F   NKLG GG+G VYKGT  +G  +AVK+LS  S QG+ +F NE+  ++ +QHRNLV+L G  ++G
Sbjct:  153 WEALMIRMIDQASYLYYAAGIRKLETSISRIYGFVQCSRDLSLQNCTKCLQQNVVEYR-------SCCRGRQGGIILRPSCFIRWELYPFLGLFDNIRPRQKDGKSISTGAIVAIIV-VPIL-LLALGVGLWKRRKAYKTKTTKIADDITTSGSLQFEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKG 378          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  325 IVGIAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNT---FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            +V +  P GI   + ++ V   RR +     E+    DS       F    +  AT +F   NKLG+GG+G VYKG L  G+ IAVK+L+  S QG+ +F NE+  ++ +QHRNLV+L G C EG
Sbjct:  282 VVVVVFPTGINLAVFVAFVLAYRRMRRRIYTEINKNSDSDGQATLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEG 406          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 77/260 (29.62%), Postives = 119/260 (45.77%), Query Frame = 1
Query:   37 RRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNATVSENHLEIHLFWAGKGT-CCVPKQGDYGPAISALSVVSAFKPSVSGLPP------STAGNKNHTGL-IVGIAVPLGILGLI-----AISIVFYMRRKKDNDDEEV---------------------LVGIDSKPNT---------FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            +R+F IYI       +FDI   AGG N+ I +++   VS  +    + W   G    V   GD     + LS +  FK S +G         ST  + + + + I+ I+V  GI  +I      I +V   ++++   DE                         G   + NT         F+ AE+R+AT++FD    +G GG+G VY+G L DG +IA+K+ +  S QG  +F  EI  +S ++HR+LV L G C E
Sbjct:  334 QRIFRIYINNQTAAGNFDIFAHAGGKNKGIYQDYLDPVSSKN---DVLWIQLGPDSSVGASGD-----ALLSGLEIFKLSKNGNLAHLIRFDSTGHSVSDSKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSKSDESKNNPPGWRPLFLHVNNSTANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDE 585          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 1
Query:  319 GLIVGIAVPLGILGLIAISIV-FYMR-RKKDNDDEEVLVGIDSKPNT-FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            G+I    VP+ I  L+ I ++  Y R RK  N   E       +    F +  + +AT DF   NK+G+GG+G VYKG L  G  IAVK+L+  S QG+ +F NE+  ++ +QHRNLV+L G C EG
Sbjct:  279 GIIAIFVVPIVINLLVFIGLIRAYTRIRKSYNGINEAQYDYGGQSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEG 405          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 53/169 (31.36%), Postives = 80/169 (47.34%), Query Frame = 1
Query:  274 VSGLPPSTAGN------------KNHTGLIVGIAVPLGIL---GLIAISIVFYMRRKKDNDDEEVLV----------------GIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            + G P  TAG              NH  L++G++     L   G I     F  R+++ N  ++                    +DS    F+  EL  AT++F  +  LGEGG G VYKG L DGR++AVK+  +       +F+NE+  +S + HRN+V+L GCC+E
Sbjct:  331 IDGNPVCTAGKCVNLLGGYTCEYTNHRPLVIGLSTSFSTLVFIGGIYWLYKFIRRQRRLNQKKKFFKRNGGLLLQQQLTTTEGNVDST-RVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLE 498          
The following BLAST results are available for this feature:
BLAST of CF503966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
CRK18_ARATH3.599e-1733.54Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y5457_ARATH4.701e-1733.54Probable LRR receptor-like serine/threonine-protei... [more]
Y1839_ARATH8.019e-1748.86Probable serine/threonine-protein kinase At1g18390... [more]
CRK33_ARATH8.019e-1736.24Putative cysteine-rich receptor-like protein kinas... [more]
CRK14_ARATH8.019e-1729.37Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK24_ARATH1.368e-1630.64Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK36_ARATH1.786e-1639.20Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1357_ARATH3.047e-1629.62Probable receptor-like protein kinase At1g30570 OS... [more]
CRK38_ARATH3.047e-1640.94Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
WAKLJ_ARATH3.980e-1631.36Wall-associated receptor kinase-like 10 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-454 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503966 ID=CF503966; Name=CF503966; organism=Citrus sinensis; type=EST; length=706bp
CTTGATCGAAGCACAGAAAGGTGGGAGAGTCTTGCAAGGCGTGTTTTTGA
TATCTACATTCAGGGAACTCTCCGGTGGAAGGATTTTGACATATCAAAGG
AGGCGGGAGGGCCTAACAGAGCTATTATAAAGAATTTCAATGCCACTGTG
TCAGAAAACCATCTTGAAATTCACCTATTTTGGGCTGGTAAAGGGACCTG
CTGCGTACCTAAACAAGGTGATTATGGACCAGCAATTTCAGCTCTCAGTG
TCGTTTCAGCTTTCAAACCATCTGTAAGTGGATTACCCCCAAGTACTGCA
GGGAATAAGAACCACACAGGGTTGATTGTTGGTATTGCAGTTCCTCTTGG
AATTTTGGGCTTGATAGCGATATCTATAGTGTTCTACATGCGGAGAAAAA
AAGACAACGATGATGAGGAAGTGCTAGTTGGGATAGACTCTAAACCAAAC
ACTTTCAGCTATGCTGAGTTGAGATCTGCAACACAAGACTTTGACCCTTC
AAACAAGCTTGGAGAGGGAGGATATGGACCTGTGTACAAGGGTACTCTAT
CTGATGGGAGAGTAATAGCTGTGAAGCAACTTTCAATAGCATCTCACCAA
GGGAAGAATCAATTTGTAAATGAGATTGCTACCATATCTGCAGTGCAACA
TCGCAATCTTGTGAGATTGTATGGATGCTGCATTGAAGGACCAGGCGCCT
CCTTGT
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