CF503966

Overview
NameCF503966
Unique NameCF503966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig511 contig Csv1_Contig511:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 45/135 (33.33%), Postives = 77/135 (57.04%), Query Frame = 1
Query:  286 PPSTAGNKNHTGLIVGIAVPLG-ILGLIAISIVFYMRRKKDNDDEEVLVGID-SKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 681
            PP+ A  + + G ++ + V L  ++ ++ + +  +M  KK    EE+L   +   P+ F Y +L  AT+ F  +  +G GG+G VY+G + S    IAVK+++  S QG  +FV EI ++  ++H+NLV L G C
Sbjct:  293 PPNKAKKRGYNGKVIALIVALSTVISIMLVLLFLFMMYKKRMQQEEILEDWEIDHPHRFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWC 427          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  454 FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 684
            FS  EL+ AT +F  +  LG+GG G VYKG L++GR++AVK+  +       +F+NE+  +S + HRN+V+L GCC+
Sbjct:  420 FSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCL 496          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 1
Query:  454 FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            FS  EL  AT +F+ +  LG+GG G VYKG L DGR++AVK+          +F+NE+  ++ + HRN+V+L GCC+E
Sbjct:  404 FSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLE 481          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 1
Query:  430 GIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            G   K   F+  EL  AT++F  +  LG GG G VYKG L DGR +AVK+  +       +F+NE+  +S + HR++V+L GCC+E
Sbjct:  433 GYVEKTRVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLE 518          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  424 LVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            L G  ++   FS  +L +AT  F+ S  LG+GG G VYKG L DG ++AVK+      +   +F+NEI  +S + HRN+V++ GCC+E
Sbjct:  368 LHGSVNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLE 455          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 1
Query:  454 FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            FS  EL  AT +F+ +  LG+GG G VYKG L DGR++AVK+          +F+NE+  ++ + HRN+V+L GCC+E
Sbjct:  412 FSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLE 489          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 59/156 (37.82%), Postives = 90/156 (57.69%), Query Frame = 1
Query:  265 KPSVSGLPPSTAGNK-----NHTGLI----VGIAVPLGILGLIAISIVF---YMRRKKDNDDEEV-LVGIDS-KPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            +P V+  PPS A N+     N +G I    +   V +GI+ LI IS +    + R++K   + E+   GI S +   + +  + +AT +F  S +LG GG G V+KG L DG+ IAVK+LS  + Q K +F NE+  ++ +QHRNLVRL G  ++G
Sbjct:  272 RPVVASQPPS-ADNRDKKRDNSSGKISMKTILAIVVVGIVILIIISGILARRFARKEKPYQEVELNQTGITSVRSLQYKFKTIETATNNF--SERLGHGGSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKG 424          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 61/153 (39.87%), Postives = 78/153 (50.98%), Query Frame = 1
Query:  271 SVSGLPPSTAGNKNHTGLIVGIAVPLGILG------LIAISIVFYMRRKKDNDDEEVLVGIDS-------KPNT----FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 678
            S+S   P  +  K HT     +A+ LGI G      +IA  I  Y R  K     EV  G +        +PNT    F   EL  AT +F   N +G GG+G VYKG L DG VIAVK++  +  QG  +F NE+  IS ++HRNLV L GC
Sbjct:  212 SLSLRSPLNSKKKRHT-----VALALGITGAIFGALVIAGLICLYFRFGKAVKGGEV--GWEDQGSRPKWRPNTGSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGC 357          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  442 KPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            K   FS  EL  AT +F+ +  +G+GG G VYKG L DGR +AVK+ ++       +F+NE+  +S + HR++V+L GCC+E
Sbjct:  438 KTKLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLE 519          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  316 TGLIVGIAVPLGILGLIA-------ISIVFYMRRKK--------DNDDEEVL----VGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 681
            +G+ +G++V + I+G IA       +++VF+++R K        D + E  L    + ++S    +++ EL SAT  F   +++G GGYG VYKG L  G V+AVK+    S QG+ +F  EI  +S + HRNLV L G C
Sbjct:  556 SGMSIGVSVGI-IIGAIAFFLVLSSLALVFFIKRSKRKRKTREVDMEQEHPLPKPPMNMESVKG-YNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYC 694          
The following BLAST results are available for this feature:
BLAST of CF503966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
LRKA3_ARATH1.975e-1533.33Lectin-domain containing receptor kinase A4.3 OS=A... [more]
WAKLF_ARATH2.580e-1544.16Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
WAKLB_ARATH2.580e-1544.87Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLN_ARATH3.369e-1541.86Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLG_ARATH3.369e-1542.05Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLD_ARATH3.369e-1544.87Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
CRK13_ARATH4.400e-1537.82Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y1105_ARATH5.747e-1539.87Probable receptor-like protein kinase At1g11050 OS... [more]
WAKLL_ARATH5.747e-1542.68Putative wall-associated receptor kinase-like 13 O... [more]
Y5374_ARATH7.505e-1536.17Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-454 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503966 ID=CF503966; Name=CF503966; organism=Citrus sinensis; type=EST; length=706bp
CTTGATCGAAGCACAGAAAGGTGGGAGAGTCTTGCAAGGCGTGTTTTTGA
TATCTACATTCAGGGAACTCTCCGGTGGAAGGATTTTGACATATCAAAGG
AGGCGGGAGGGCCTAACAGAGCTATTATAAAGAATTTCAATGCCACTGTG
TCAGAAAACCATCTTGAAATTCACCTATTTTGGGCTGGTAAAGGGACCTG
CTGCGTACCTAAACAAGGTGATTATGGACCAGCAATTTCAGCTCTCAGTG
TCGTTTCAGCTTTCAAACCATCTGTAAGTGGATTACCCCCAAGTACTGCA
GGGAATAAGAACCACACAGGGTTGATTGTTGGTATTGCAGTTCCTCTTGG
AATTTTGGGCTTGATAGCGATATCTATAGTGTTCTACATGCGGAGAAAAA
AAGACAACGATGATGAGGAAGTGCTAGTTGGGATAGACTCTAAACCAAAC
ACTTTCAGCTATGCTGAGTTGAGATCTGCAACACAAGACTTTGACCCTTC
AAACAAGCTTGGAGAGGGAGGATATGGACCTGTGTACAAGGGTACTCTAT
CTGATGGGAGAGTAATAGCTGTGAAGCAACTTTCAATAGCATCTCACCAA
GGGAAGAATCAATTTGTAAATGAGATTGCTACCATATCTGCAGTGCAACA
TCGCAATCTTGTGAGATTGTATGGATGCTGCATTGAAGGACCAGGCGCCT
CCTTGT
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