CF503966

Overview
NameCF503966
Unique NameCF503966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig511 contig Csv1_Contig511:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  283 LPPSTAGNKNHTGLIVGIAVPLGILGLIAIS--IVFYMRRKKDNDDEE---------------------VLVGIDSKPN-TFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            +P S++ +K++ GLIVG A+   +L ++ +    V Y +RK+  D                         L  I +  N    +A ++ AT +FD S  +G GG+G VYKG L+DG  +AVK+ +  S QG  +F  EI  +S  +HR+LV L G C E
Sbjct:  393 VPGSSSSSKSNLGLIVGSAIG-SLLAVVFLGSCFVLYKKRKRGQDGHSKTWMPFSINGTSMGSKYSNGTTLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDE 550          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 49/151 (32.45%), Postives = 83/151 (54.97%), Query Frame = 1
Query:  253 VSAFKPSVSGLPPSTAGNKNHTGLIVGIAVPLGILGLIAISIVFYMRRKK-------DNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 681
            +SA   SVS L  S+    N   + +G+++   +  ++++  ++Y ++++        +  EE L+G+ +   +F++ EL  AT  F   + LG GG+G VY+G   DG V+AVK+L  +    G +QF  E+  IS   HRNL+RL G C
Sbjct:  215 ISASPLSVS-LRSSSGRRTNILAVALGVSLGFAVSVILSLGFIWYRKKQRRLTMLRISDKQEEGLLGLGNL-RSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYC 363          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 56/192 (29.17%), Postives = 85/192 (44.27%), Query Frame = 1
Query:  139 NATVSENH--LEIHLFWAGKGTCCVPKQGDYGPAISALSVVSAFKPSVSGLPPSTAGNKNHTGLIVGIA-VPLGILGLIAISIVFYMRRKKDNDDEEVLVGI--------DSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 681
            N T SEN    ++ L   G G  C  ++G  G A +             GL         H  +++G A + +G+L ++ +   ++ R K+    E   +          +S    ++Y E+  AT  F   N LG G YG VY G   +   +A+K+L        +Q VNEI  +S+V H NLVRL GCC
Sbjct:  193 NTTCSENADCAKVKLDDGGLGHRCTCREGFSGKAFTVPGGCHRLVYKRKGL---------HKLVVLGTAGILVGVLVIVVLIATYFFRNKQSASSERASIANRLLCELAENSSVPFYTYKEIEKATDSFSDKNMLGTGAYGTVYAGEFPNSSCVAIKRLKHKDTTSIDQVVNEIKLLSSVSHPNLVRLLGCC 375          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1
Query:  454 FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            FS  EL+ AT +F     LG+G  G VYKG + DG++IAVK+  +       +F+NEI  +S + HRN+V+L GCC+E
Sbjct:  420 FSSEELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKIIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLE 497          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 58/155 (37.42%), Postives = 80/155 (51.61%), Query Frame = 1
Query:  262 FKPSVSGLPPS---TAGNKNHTGLIVG-IAVPLGIL-GLIAISIVFYMRRKKDN--------DDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 684
            F P    +PP    T G  + TG I G +A    +L    A++  ++ RRK           +D EV +G   +   FS  EL+ AT  F   N LG GG+G VYKG L+DG ++AVK+L    +  G+ QF  E+  IS   HRNL+RL G C+
Sbjct:  219 FSPPPPFIPPPIVPTPGGYSATGAIAGGVAAGAALLFAAPALAFAWWRRRKPQEFFFDVPAEEDPEVHLG---QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCM 370          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  364 IAISIVFYMRRKKDNDDEEVLVGIDSKPNTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            +A +I+F +  K    D+  +  +  KP T  Y EL  AT+ +     +GEGG+G VY+GTL DG+ +AVK  S  S QG  +F NE+  +SA+QH NLV L G C E
Sbjct:  561 MATNIIFSLPSK----DDFFIKSVSVKPFTLEYIEL--ATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNE 660          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 1
Query:  334 IAVPLGILGLIAISIVFYMRRKKDNDDEEVLVGIDSKPNT--FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            I VP  I  +I + ++F  +RK+ +     +   ++  +   F    + +AT +F   NKLG+GG+G VYKG L  G+ IAVK+L   S QG  +F NE+  ++ +QHRNLV+L G C E
Sbjct:  291 IVVPSVINLIIFVVLIFSWKRKQSHTIINDVFDSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNE 410          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1
Query:  454 FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            F +  +++AT +F  SNKLG GG+G VYKG   +G  +A K+LS  S QG+ +F NE+  ++ +QH+NLV L G  +EG
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEG 429          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1
Query:  454 FSYAELRSATQDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIE 687
            FS  EL  AT +F     LG+GG G VYK  L DG ++AVK+  +       +F+NEI  +S + HRN+V+L GCC+E
Sbjct:  416 FSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLE 493          
BLAST of CF503966 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  448 NTFSYAELRSATQDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 690
            +TF++ EL +AT +F P   LGEGG+G VYKG L S G+V+AVKQL     QG  +F+ E+  +S + H NLV L G C +G
Sbjct:   72 HTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADG 153          
The following BLAST results are available for this feature:
BLAST of CF503966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
HERK_ARATH7.505e-1533.33Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y2239_ARATH9.802e-1532.45Probable LRR receptor-like serine/threonine-protei... [more]
WAKLR_ARATH9.802e-1529.17Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLE_ARATH1.280e-1444.87Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
SERK2_ARATH2.184e-1437.42Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
NORK_PEA2.184e-1442.59Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK37_ARATH2.184e-1438.33Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK21_ARATH2.184e-1445.57Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
WAKLC_ARATH2.852e-1444.87Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
PBS1_ARATH2.852e-1448.78Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-454 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503966 ID=CF503966; Name=CF503966; organism=Citrus sinensis; type=EST; length=706bp
CTTGATCGAAGCACAGAAAGGTGGGAGAGTCTTGCAAGGCGTGTTTTTGA
TATCTACATTCAGGGAACTCTCCGGTGGAAGGATTTTGACATATCAAAGG
AGGCGGGAGGGCCTAACAGAGCTATTATAAAGAATTTCAATGCCACTGTG
TCAGAAAACCATCTTGAAATTCACCTATTTTGGGCTGGTAAAGGGACCTG
CTGCGTACCTAAACAAGGTGATTATGGACCAGCAATTTCAGCTCTCAGTG
TCGTTTCAGCTTTCAAACCATCTGTAAGTGGATTACCCCCAAGTACTGCA
GGGAATAAGAACCACACAGGGTTGATTGTTGGTATTGCAGTTCCTCTTGG
AATTTTGGGCTTGATAGCGATATCTATAGTGTTCTACATGCGGAGAAAAA
AAGACAACGATGATGAGGAAGTGCTAGTTGGGATAGACTCTAAACCAAAC
ACTTTCAGCTATGCTGAGTTGAGATCTGCAACACAAGACTTTGACCCTTC
AAACAAGCTTGGAGAGGGAGGATATGGACCTGTGTACAAGGGTACTCTAT
CTGATGGGAGAGTAATAGCTGTGAAGCAACTTTCAATAGCATCTCACCAA
GGGAAGAATCAATTTGTAAATGAGATTGCTACCATATCTGCAGTGCAACA
TCGCAATCTTGTGAGATTGTATGGATGCTGCATTGAAGGACCAGGCGCCT
CCTTGT
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