CF503968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB3_ORYSJ (Tubulin beta-3 chain OS=Oryza sativa subsp. japonica GN=TUBB3 PE=2 SV=2) HSP 1 Score: 292.738 bits (748), Expect = 5.062e-82 Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 5.062e-82 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB5_ORYSJ (Tubulin beta-5 chain OS=Oryza sativa subsp. japonica GN=TUBB5 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 6.603e-82 Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 6.603e-82 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB7_MAIZE (Tubulin beta-7 chain OS=Zea mays GN=TUBB7 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 1.465e-81 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDSDLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 1.465e-81 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB1_ELEIN (Tubulin beta-1 chain OS=Eleusine indica GN=TUBB1 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 1.465e-81 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDSDLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 1.465e-81 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max GN=TUBB PE=2 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 1.466e-81 Identity = 135/137 (98.54%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS+LQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 1.466e-81 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB5_GOSHI (Tubulin beta-5 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 4.242e-81 Identity = 134/137 (97.81%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHG+D+TGKY+GDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDNTGKYNGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 4.242e-81 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB7_ORYSJ (Tubulin beta-7 chain OS=Oryza sativa subsp. japonica GN=TUBB7 PE=2 SV=2) HSP 1 Score: 287.345 bits (734), Expect = 2.089e-80 Identity = 133/137 (97.08%), Postives = 136/137 (99.27%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHG+D TG+Y+GDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 2.089e-80 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB3_ELEIN (Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 2.089e-80 Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDSDLQLERINVYYNEA GGR+VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEAGGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 2.089e-80 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB4_WHEAT (Tubulin beta-4 chain OS=Triticum aestivum GN=TUBB4 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 4.635e-80 Identity = 133/137 (97.08%), Postives = 136/137 (99.27%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGID TG+Y+GDSDLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGRYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 4.635e-80 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB3_WHEAT (Tubulin beta-3 chain OS=Triticum aestivum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 6.045e-80 Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVICDEHGID TGKY+GDSDLQLERINVYYNEASGGR+VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 6.045e-80 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168 The following BLAST results are available for this feature:
BLAST of CF503968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 412
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503968 ID=CF503968; Name=CF503968; organism=Citrus sinensis; type=EST; length=661bpback to top |