CF503968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB1_SOLTU (Tubulin beta-1 chain OS=Solanum tuberosum GN=TUBB1 PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 8.606e-76 Identity = 126/140 (90.00%), Postives = 134/140 (95.71%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSG---DSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIG+KFWEVICDEHG+D TG+Y G +SDLQLERINVY+NEASGGRYVPRAVLMDLEPGTMDS+RSGP+GQIFRPDN VFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNLVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH 140 HSP 2 Score: 32.7278 bits (73), Expect = 8.606e-76 Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 ++REEYPDRMMLTFS Sbjct: 157 KVREEYPDRMMLTFS 171
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB2_MAIZE (Tubulin beta-2 chain OS=Zea mays GN=TUBB2 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 8.607e-76 Identity = 124/137 (90.51%), Postives = 133/137 (97.08%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y G SD+QLER+NVYYNEAS GR+VPRAVLMDLEPGTMD+VR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYMGTSDVQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDAVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 32.3426 bits (72), Expect = 8.607e-76 Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMM+TFS Sbjct: 154 KIREEYPDRMMMTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB8_MAIZE (Tubulin beta-8 chain OS=Zea mays GN=TUBB8 PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 8.607e-76 Identity = 125/137 (91.24%), Postives = 132/137 (96.35%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y G SDLQLER+NVYYNEAS GR+VP AVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPGAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 8.607e-76 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB2_SOYBN (Tubulin beta-2 chain OS=Glycine max GN=TUBB2 PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 2.490e-75 Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MRE LHIQGGQCGNQIGAKFWEV+C EHGID TG+Y GDS+LQLERINVYYNEAS GR+V RAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MRESLHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSELQLERINVYYNEASCGRFVRRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 2.490e-75 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB7_ARATH (Tubulin beta-7 chain OS=Arabidopsis thaliana GN=TUBB7 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 3.248e-75 Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIG+KFWEV+ EHGID TG+Y GDS+LQLER+NVYYNEAS GRYVPRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 32.3426 bits (72), Expect = 3.248e-75 Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMM+TFS Sbjct: 154 KIREEYPDRMMMTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB1_MAIZE (Tubulin beta-1 chain OS=Zea mays GN=TUBB1 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 3.248e-75 Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y GDSDLQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDSVRSGP+G IFRPDNFVFGQSGAGNN AKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYGGDSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNSAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 3.248e-75 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB2_DAUCA (Tubulin beta-2 chain OS=Daucus carota GN=TUBB2 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 4.236e-75 Identity = 123/137 (89.78%), Postives = 132/137 (96.35%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+ +SDLQL+RINVYYNEASGGRYVPRAVLMDLEPGTMDSV++GP GQIFRPDNF+FGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC+CLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGQVLSESDLQLDRINVYYNEASGGRYVPRAVLMDLEPGTMDSVKTGPHGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCECLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 4.236e-75 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB2_LUPAL (Tubulin beta-2 chain OS=Lupinus albus GN=TUBB2 PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 7.205e-75 Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y GD+ LQLER+NVYYNEAS GR+VPRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYEGDNVLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGTYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 7.205e-75 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 7.206e-75 Identity = 122/137 (89.05%), Postives = 130/137 (94.89%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILH+Q GQCGNQIG KFWEV+CDEHGID TG Y G+ LQLER+NVYYNEASGGRYVPRAVLMDLEPGTMDS+RSGPFG+IFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH Sbjct: 1 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDATGNYVGNFHLQLERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICH 137 HSP 2 Score: 33.113 bits (74), Expect = 7.206e-75 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168
BLAST of CF503968 vs. ExPASy Swiss-Prot
Match: TBB3_MAIZE (Tubulin beta-3 chain OS=Zea mays GN=TUBB3 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 2.085e-74 Identity = 124/137 (90.51%), Postives = 129/137 (94.16%), Query Frame = 2 Query: 158 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 568 MREILHIQGGQCGNQIGAKFWEVIC EHG+D TG YSG S QLERINVYYNEA GGRYVPRAVLMDLEPGTM+S+R+GPFG IFRPDNFV+GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDSTGCYSGVSPQQLERINVYYNEAGGGRYVPRAVLMDLEPGTMESIRAGPFGGIFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137 HSP 2 Score: 33.113 bits (74), Expect = 2.085e-74 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 616 QIREEYPDRMMLTFS 660 +IREEYPDRMMLTFS Sbjct: 154 KIREEYPDRMMLTFS 168 The following BLAST results are available for this feature:
BLAST of CF503968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 412
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503968 ID=CF503968; Name=CF503968; organism=Citrus sinensis; type=EST; length=661bpback to top |