CF503971

Overview
NameCF503971
Unique NameCF503971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_ASHGO (Protein SEY1 OS=Ashbya gossypii GN=SEY1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22
Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFT--------IAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +QLID   +FN   LE F R       GL Y V+++ G QSSGKSTL+N LF+T F  M+A   R QTTKGIWIA    ++             +D+EGSD  ERGE D  FE+++ALFALA ++++++NM
Sbjct:   13 IQLIDEQKQFNEKTLEYFKRCIGERDVGLDYHVISVFGSQSSGKSTLLNALFNTKFDTMNAQVKRQQTTKGIWIAHTREVQTTANTGKGVDFFVLDVEGSDGAERGE-DKDFERKAALFALATSEVLIVNM 142          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PLAKH (Protein SEY1 homolog OS=Plasmodium knowlesi (strain H) GN=PKH_133110 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.128e-22
Identity = 60/138 (43.48%), Postives = 88/138 (63.77%), Query Frame = 3
Query:  174 QLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIA----------------KCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            Q+ID +G    D  E  +R  KL + G +Y VVAI+G QSSGKSTL+N+LF T+F  M+   G SQTT+G+W++                    I P T+ +D+EG+DS+ERG++  TFE +SALF+LA+AD +++N+
Sbjct:    8 QIIDYDGNMIADLKEWMIRN-KLANLGFNYNVVAILGSQSSGKSTLLNNLFKTSFDVMNTKLGHSQTTQGLWLSFDTFEESPVSPLEKGNSTTPINP-TLILDVEGNDSKERGDNRLTFEHRSALFSLALADCLIVNL 143          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_BABBO (Protein SEY1 homolog OS=Babesia bovis GN=BBOV_II001090 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.779e-22
Identity = 58/126 (46.03%), Postives = 83/126 (65.87%), Query Frame = 3
Query:  174 QLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIW----IAKCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            + ID N + N +G  + +++ K +  G +Y V++I+G QSSGKS+L+N +F  +F  M+   G SQTTKG+W    I K  G    TI +D+EG+DSRERGE   TFE +SAL  LAI+D V+IN+
Sbjct:   19 EFIDYNCDIN-NGFNDLLKSQKFDKLGFNYNVLSILGCQSSGKSSLLNSVFGLDFDVMNTKLGHSQTTKGLWGALVIPKDTGSGNVTIVIDVEGTDSRERGEGRLTFEHRSALLCLAISDCVVINL 143          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_THEAN (Protein SEY1 homolog OS=Theileria annulata GN=TA08650 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.630e-22
Identity = 53/114 (46.49%), Postives = 77/114 (67.54%), Query Frame = 3
Query:  210 GLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIW----IAKCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            G  +F++ +     G  + VV I+G QSSGKS L+N LF+ +F+ MDA +G SQTTKGIW    ++K   +   T+  D EG+DSRERGE   TFE +S+LF LA++D+V++N+
Sbjct:   32 GFNDFLKKSGFEDFGFKFNVVTILGSQSSGKSHLLNSLFNASFQTMDASKGHSQTTKGIWGSLVLSKDTSMNA-TVVFDSEGTDSRERGEGRLTFEHRSSLFCLALSDVVIVNI 144          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PLAVI (Protein SEY1 homolog OS=Plasmodium vivax GN=PVX_085645 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.741e-22
Identity = 60/138 (43.48%), Postives = 89/138 (64.49%), Query Frame = 3
Query:  174 QLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIA------KCVG----------IEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            Q+ID +G    D  E  +R  KL + G +Y V+AI+G QSSGKSTL+N+LF T+F  M+   G SQTT+G+W++         G          + P T+ +D+EG+DS+ERG++  TFE +SALF+LA+AD V++N+
Sbjct:    6 QIIDYDGNIMEDLKEWMIRN-KLANLGFNYNVIAILGSQSSGKSTLLNNLFKTSFDVMNTKLGHSQTTQGLWLSFDTFEDSSAGPSEQGSTTRKVNP-TLILDVEGNDSKERGDNRLTFEHRSALFSLALADCVIVNL 141          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PLACH (Protein SEY1 homolog OS=Plasmodium chabaudi GN=PC000321.02.0 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.741e-22
Identity = 59/146 (40.41%), Postives = 89/146 (60.96%), Query Frame = 3
Query:  174 QLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIA---------------------KCVGIEPF---TIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            Q+ID  G   +D L+ ++    L+  G +Y V+AI+G QSSGKSTL+N+LF T+F  M+   G SQTT+G+W++                        G +P    T+ +D+EG+DS+ERGE+  TFE +SALF+LA+AD V++N+
Sbjct:    8 QIIDYEGHI-IDDLKEWMSDNGLSKLGFNYNVIAILGSQSSGKSTLLNNLFKTSFEVMNTKLGHSQTTQGLWLSYDKFEDELAGGSSEGTDAESKNKSGDKPVVNPTLILDVEGNDSKERGENRLTFEHRSALFSLALADCVIVNL 152          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_USTMA (Protein SEY1 OS=Ustilago maydis GN=SEY1 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.192e-22
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            MQLID   +FN       +    L   G  Y + A++G QS+GKSTL+N LF TNF  M     R QTTKGIW+  C G++   + MD+EG+D RERGED   FE++SALF++A A+++++N+
Sbjct:   85 MQLIDEQQKFNSADFSPHLENWGLADAGFGYDLCAVLGSQSTGKSTLLNKLFGTNFDVMSE-SARQQTTKGIWM--CKGLKMNVLVMDVEGTDGRERGEDQ-DFERKSALFSMASAEVLIVNL 203          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_LACBS (Protein SEY1 OS=Laccaria bicolor (strain S238N-H82) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.192e-22
Identity = 59/123 (47.97%), Postives = 81/123 (65.85%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID   +F  D L   +    L   G SY +VA+ G QS+GKSTL+N LF T F  MD  R R QTTKGIW+  C G +   + MD+EG+D RERGED   FE++SALF+LA ++I+++N+
Sbjct:   35 IQIIDDEKKFTPD-LATQIERWGLRDAGFSYNIVAVFGSQSTGKSTLLNRLFGTTFDVMDETR-RQQTTKGIWM--CRGKDMGVMVMDVEGTDGRERGEDQ-DFERKSALFSLASSEILIVNL 152          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_COPC7 (Protein SEY1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.192e-22
Identity = 59/123 (47.97%), Postives = 81/123 (65.85%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID N  F  D L   +    L   G +Y +VA+ G QS+GKSTL+N LF T F  MD  R R QTTKGIW+  C G +   + MD+EG+D RERGED   FE++SALF+LA ++++++NM
Sbjct:   21 IQIIDENKTFTPD-LTQQIERWGLRDSGFNYNLVAVFGSQSTGKSTLLNRLFGTTFDVMDETR-RQQTTKGIWM--CRGKDMSVMVMDVEGTDGRERGEDQ-DFERKSALFSLASSEVLIVNM 138          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_DEBHA (Protein SEY1 OS=Debaryomyces hansenii GN=SEY1 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 8.087e-22
Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGI----------EPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+I+ N +FN   L    ++T  +  G +Y ++++ G QS+GKSTL+NHLF+TNF  MD  + R QTTKGIW+A    +          E     MD+EG+D RERGED   FE+++ALFAL+ ++I++IN+
Sbjct:   39 IQMINENKQFNESILNYIEKSTSSSDIGNNYHIISVFGSQSTGKSTLLNHLFNTNFDVMDESK-RQQTTKGIWMAHSPLVSSTLTNGSKSEENIFVMDVEGTDGRERGEDQ-DFERKAALFALSTSEILIINI 169          
The following BLAST results are available for this feature:
BLAST of CF503971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
SEY1_ASHGO1.629e-2245.80Protein SEY1 OS=Ashbya gossypii GN=SEY1 PE=3 SV=1[more]
SEY1_PLAKH2.128e-2243.48Protein SEY1 homolog OS=Plasmodium knowlesi (strai... [more]
SEY1_BABBO2.779e-2246.03Protein SEY1 homolog OS=Babesia bovis GN=BBOV_II00... [more]
SEY1_THEAN3.630e-2246.49Protein SEY1 homolog OS=Theileria annulata GN=TA08... [more]
SEY1_PLAVI4.741e-2243.48Protein SEY1 homolog OS=Plasmodium vivax GN=PVX_08... [more]
SEY1_PLACH4.741e-2240.41Protein SEY1 homolog OS=Plasmodium chabaudi GN=PC0... [more]
SEY1_USTMA6.192e-2245.53Protein SEY1 OS=Ustilago maydis GN=SEY1 PE=3 SV=2[more]
SEY1_LACBS6.192e-2247.97Protein SEY1 OS=Laccaria bicolor (strain S238N-H82... [more]
SEY1_COPC76.192e-2247.97Protein SEY1 OS=Coprinopsis cinerea (strain Okayam... [more]
SEY1_DEBHA8.087e-2242.86Protein SEY1 OS=Debaryomyces hansenii GN=SEY1 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-459 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503971 ID=CF503971; Name=CF503971; organism=Citrus sinensis; type=EST; length=540bp
CCATTCTCACTATTCTCAGGAAACTTGATACCAAGACAAATATAAAAAAC
AAACATTAAAATCTAAATTGATTGATCCTCTAAATCAGTTCAATCGAAAC
CCTAGCTTTTCACTTGGCTCTACTGTGGGGGGCAATAAGGCTCATGGGCA
TGGCGGACGAATGCTGCTGCATGCAACTGATCGACGGCAATGGCGAATTC
AATGTGGATGGCCTTGAGAACTTCGTTAGAACCACTAAGCTCAACCACTG
CGGCCTCTCTTACGCCGTCGTCGCCATCATGGGCCCTCAAAGTAGCGGGA
AAAGTACTTTGATGAATCATCTTTTCCATACCAATTTCAGAGAGATGGAT
GCATTCAGGGGAAGGAGTCAAACAACTAAAGGCATTTGGATAGCGAAGTG
TGTTGGCATTGAGCCTTTCACAATTGCCATGGATTTGGAGGGTAGTGATA
GCAGGGAAAGAGGGGAGGACGACACAACATTTGAGAAACAAAGCGCCCTG
TTTGCTTTGGCAATTGCAGATATTGTGCTGATAAACATGT
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