CF503971

Overview
NameCF503971
Unique NameCF503971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_UNCRE (Protein SEY1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20
Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEP----------------FTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q++D + EFN + L  ++    +   G +Y ++++ G QS+GKSTL+NHLF T+F  M A   R QTTKGIW++K    EP                  + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   23 VQVVDEDKEFNRN-LSKYLAYENVTPAGFNYHLISVFGSQSTGKSTLLNHLFGTHFSVM-AETERRQTTKGIWMSKNKRQEPQRENSLPHVQNPNMADNILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 158          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_MAGGR (Protein SEY1 OS=Magnaporthe grisea GN=SEY1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.886e-20
Identity = 55/127 (43.31%), Postives = 86/127 (67.72%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLEN-FVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCV---GIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID + ++N  GL N ++R T +   G +Y ++++ G QS+GKSTL+N+LF T F  M     R QTTKGIW++K      +    + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   21 IQVIDEDKQYN--GLVNDYLRRTHVAEAGFNYHLISVFGSQSTGKSTLLNNLFGTEFSVMSESE-RRQTTKGIWMSKNKREGKMAENILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 143          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_NANOT (Protein SEY1 OS=Nannizzia otae (strain CBS 113480) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.291e-19
Identity = 53/131 (40.46%), Postives = 84/131 (64.12%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAK--------CVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q++DG+ EFN + L  ++    +   G +Y ++++ G QS+GKSTL+N LF T+F  M     R QTTKGIW++K           +    + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   22 VQVVDGDKEFNPN-LSKYLAHENVTPAGFNYHLISVFGSQSTGKSTLLNTLFKTDFSVMSETE-RRQTTKGIWLSKNKRTASNEKEKMADNVLVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 149          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_CLAL4 (Protein SEY1 OS=Clavispora lusitaniae (strain ATCC 42720) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.686e-19
Identity = 55/134 (41.04%), Postives = 84/134 (62.69%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIE-----------PFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID + +FN   L+    +++    G  Y ++++ G QS+GKSTL+NHLF TNF  MD    R QTTKGIW+A   G+               + MD+EG+D RERGED   FE+++ALFAL+ ++++++NM
Sbjct:   39 IQIIDEHKQFNKQILDYI--SSRSRQPG-DYRIISVFGSQSTGKSTLLNHLFSTNFDVMDEV-NRQQTTKGIWMAVSPGVSNSLPANAHVPPENILVMDVEGTDGRERGEDQ-DFERKAALFALSTSEVLIVNM 167          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PHANO (Protein SEY1 OS=Phaeosphaeria nodorum GN=SEY1 PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.202e-19
Identity = 54/129 (41.86%), Postives = 86/129 (66.67%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFT------IAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q++D +  FN + L  ++   K+   G +Y ++++ G QS+GKSTL+N+LF T F  M A + R QTTKGIW++K    E  +      + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   23 IQVVDEDKVFN-NNLSTYLNIEKVIPAGFNYHLISVFGSQSTGKSTLLNYLFGTQFGVM-AEQERRQTTKGIWMSKNKRPEGGSAMAENILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 148          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PYRTR (Protein sey1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=sey1 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 53/129 (41.09%), Postives = 83/129 (64.34%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAK------CVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID +  FN   +  ++   K+   G +Y ++++ G QS+GKSTL+NHLF T F  M   + R QTTKGIW++K         +    + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   22 IQVIDEDKMFN-GNVSTYLNIEKVIPAGFNYHLISVFGSQSTGKSTLLNHLFGTQFGVMSE-QERRQTTKGIWMSKNKRESGGSSMAENILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 147          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_CANTT (Protein SEY1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=SEY1 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 55/132 (41.67%), Postives = 83/132 (62.88%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFT---------IAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+I+    FN   LE ++  T     G +Y ++++ G QS+GKSTL+N LF+TNF  MD    R QTTKGIW+A    +   +         + MD+EG+D RERGED   FE+++ALFAL+ ++I++IN+
Sbjct:   31 IQIINEEKRFNQSVLE-YINKTAPADVGNNYHIISVFGSQSTGKSTLLNKLFNTNFDVMDE-SNRQQTTKGIWLAFSPVVSTTSGHTSSKSNILVMDVEGTDGRERGEDQ-DFERKAALFALSTSEILIINI 159          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_TRYCR (Protein SEY1 homolog OS=Trypanosoma cruzi GN=Tc00.1047053511285.50 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19
Identity = 60/153 (39.22%), Postives = 85/153 (55.56%), Query Frame = 3
Query:  177 LIDGNGEF-NVDGLENFVRTT--------KLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAK-----------------------CVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            LID  G+   V+G+E ++ T          L+  G++Y VV ++G QSSGKSTL+N LF T F+ MD  + R QTTKG +I++                       C G       +D EG+D  ERGED  +FE+Q +LFAL++AD++LINM
Sbjct:   15 LIDDEGQLLPVNGIEEYLFTALGASRGGDALHRVGITYHVVGVLGGQSSGKSTLLNCLFGTKFQTMDETKRRGQTTKGAFISRANFEVLRGDDGEMDAGASALMESCAGKSLPLFVVDFEGTDGFERGEDQ-SFERQLSLFALSVADVLLINM 166          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PARBP (Protein SEY1 OS=Paracoccidioides brasiliensis (strain Pb03) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19
Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIE------------PFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID   EFN + L N++    +   G +Y ++++ G QS+GKSTL+N LF T+F  M     R QTTKGIW++K   ++               + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   23 VQVIDEEKEFNPN-LSNYLSYENVTPAGFNYHLISVFGSQSTGKSTLLNSLFGTHFSVMSETE-RRQTTKGIWLSKNKRLKSDKGQDNQTKMADNILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 154          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PARBD (Protein SEY1 OS=Paracoccidioides brasiliensis (strain Pb18) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.757e-19
Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIE------------PFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID   EFN + L N++    +   G +Y ++++ G QS+GKSTL+N LF T+F  M     R QTTKGIW++K   ++               + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   23 VQVIDEEKEFNPN-LSNYLSYENVTPAGFNYHLISVFGSQSTGKSTLLNSLFGTHFSVMSETE-RRQTTKGIWLSKNKRLKSDKGQDNQTKMADNILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 154          
The following BLAST results are available for this feature:
BLAST of CF503971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
SEY1_UNCRE9.886e-2040.29Protein SEY1 OS=Uncinocarpus reesii (strain UAMH 1... [more]
SEY1_MAGGR9.886e-2043.31Protein SEY1 OS=Magnaporthe grisea GN=SEY1 PE=3 SV... [more]
SEY1_NANOT1.291e-1940.46Protein SEY1 OS=Nannizzia otae (strain CBS 113480)... [more]
SEY1_CLAL41.686e-1941.04Protein SEY1 OS=Clavispora lusitaniae (strain ATCC... [more]
SEY1_PHANO2.202e-1941.86Protein SEY1 OS=Phaeosphaeria nodorum GN=SEY1 PE=3... [more]
SEY1_PYRTR2.876e-1941.09Protein sey1 OS=Pyrenophora tritici-repentis (stra... [more]
SEY1_CANTT2.876e-1941.67Protein SEY1 OS=Candida tropicalis (strain ATCC MY... [more]
SEY1_TRYCR3.757e-1939.22Protein SEY1 homolog OS=Trypanosoma cruzi GN=Tc00.... [more]
SEY1_PARBP3.757e-1940.00Protein SEY1 OS=Paracoccidioides brasiliensis (str... [more]
SEY1_PARBD3.757e-1940.00Protein SEY1 OS=Paracoccidioides brasiliensis (str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-459 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503971 ID=CF503971; Name=CF503971; organism=Citrus sinensis; type=EST; length=540bp
CCATTCTCACTATTCTCAGGAAACTTGATACCAAGACAAATATAAAAAAC
AAACATTAAAATCTAAATTGATTGATCCTCTAAATCAGTTCAATCGAAAC
CCTAGCTTTTCACTTGGCTCTACTGTGGGGGGCAATAAGGCTCATGGGCA
TGGCGGACGAATGCTGCTGCATGCAACTGATCGACGGCAATGGCGAATTC
AATGTGGATGGCCTTGAGAACTTCGTTAGAACCACTAAGCTCAACCACTG
CGGCCTCTCTTACGCCGTCGTCGCCATCATGGGCCCTCAAAGTAGCGGGA
AAAGTACTTTGATGAATCATCTTTTCCATACCAATTTCAGAGAGATGGAT
GCATTCAGGGGAAGGAGTCAAACAACTAAAGGCATTTGGATAGCGAAGTG
TGTTGGCATTGAGCCTTTCACAATTGCCATGGATTTGGAGGGTAGTGATA
GCAGGGAAAGAGGGGAGGACGACACAACATTTGAGAAACAAAGCGCCCTG
TTTGCTTTGGCAATTGCAGATATTGTGCTGATAAACATGT
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