CF503971

Overview
NameCF503971
Unique NameCF503971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_AJECN (Protein SEY1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19
Identity = 53/135 (39.26%), Postives = 85/135 (62.96%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIE------------PFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID + EFN + +  ++    +   G +Y ++++ G QS+GKSTL+N+LF T+F  M     R QTTKGIW++K   +E               + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   23 VQVIDEDKEFNPN-VSKYLTYENVTPAGFNYHLISVFGSQSTGKSTLLNNLFGTHFSVMSETE-RRQTTKGIWLSKNKRLELRKDRDPQAKMADNILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 154          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_AJECG (Protein SEY1 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.408e-19
Identity = 53/135 (39.26%), Postives = 85/135 (62.96%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIE------------PFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q+ID + EFN + +  ++    +   G +Y ++++ G QS+GKSTL+N+LF T+F  M     R QTTKGIW++K   +E               + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   23 VQVIDEDKEFNPN-VSKYLTYENVTPAGFNYHLISVFGSQSTGKSTLLNNLFGTHFSVMSETE-RRQTTKGIWLSKNKRLELRKDRDPQAKMADNILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 154          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_PICGU (Protein SEY1 OS=Pichia guilliermondii GN=SEY1 PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 1.864e-18
Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPF-----------TIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q++    EFN   L+   + T  +    +Y +V++ G QS+GKSTL+N LF+TNF  MD    RSQTTKGIW+A    I                 MD+EG+D RERGED   FE+++ALFAL+ +++++IN+
Sbjct:   37 VQVVSEAKEFNSLILDYVRKATPASEVNNNYHIVSVFGSQSTGKSTLLNRLFNTNFDVMDE-SNRSQTTKGIWMAYSSIITTSQGPVPSKGGENIFVMDVEGTDGRERGEDQ-DFERKAALFALSTSEVLIINV 168          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_CRYHO (Protein SEY1 homolog OS=Cryptosporidium hominis GN=Chro.80282 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.085e-18
Identity = 47/99 (47.47%), Postives = 70/99 (70.71%), Query Frame = 3
Query:  255 LSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFR-GRSQTTKGIWIAKCVGIEPFT---IAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            L + V++I+G QS+GKSTL+N LF T+F+ +D    G  QTTKG+W+    G E F    +  D+EG+DS ERGED  TFE ++ALF+LA++D +++N+
Sbjct:   29 LGFNVISILGCQSTGKSTLLNALFDTHFKVLDKLTSGYCQTTKGLWLG--CGTESFNSPILIWDVEGTDSLERGEDRATFENRAALFSLAVSDCMILNI 125          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_COCIM (Protein SEY1 OS=Coccidioides immitis GN=SEY1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.253e-18
Identity = 53/139 (38.13%), Postives = 85/139 (61.15%), Query Frame = 3
Query:  171 MQLIDGNGEFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAK-----CV-----------GIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +Q++D + EFN + L  ++    +   G +Y ++++ G QS+GKSTL+N+LF T+F  M     R QTTKGIW++K     C             +    + MD+EG+D RERGED   FE++SALFALA ++++++N+
Sbjct:   22 VQVVDEDKEFNPN-LSKYLAYEGVTPAGFNYHLISVFGSQSTGKSTLLNYLFGTHFSVMSETE-RRQTTKGIWMSKNKRQDCERENSLPHLQNNRMADNILVMDVEGTDGRERGEDQ-DFERKSALFALATSEVLIVNI 157          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY12_PARTE (Protein SEY1 homolog 2 OS=Paramecium tetraurelia GN=GSPATT00022700001 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.061e-17
Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 3
Query:  207 DGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            D L  FVRT+ ++  G +Y +V+I+G QS+GKSTL+N LF T F   +  +   QTT GIW++K   ++   + +D+EGSDS ER   +   E Q+AL ALA++   +IN+
Sbjct:   25 DQLVEFVRTSGISDIGKNYNIVSIIGSQSTGKSTLLNQLFGTKFDVQNRQQSVGQTTVGIWLSK--DVQNNVVVLDVEGSDSVERKSGENMVENQTALMALAMSHCFIINV 133          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY11_PARTE (Protein SEY1 homolog 1 OS=Paramecium tetraurelia GN=GSPATT00029660001 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.745e-16
Identity = 50/125 (40.00%), Postives = 76/125 (60.80%), Query Frame = 3
Query:  177 LIDGNG----EFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVGIEPFTIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            LID N     + + + L  FV+++ L   G  Y +V+I+G QS+GKSTL+N+LF T F   +  +   QTT GIWI+K   ++   + +D+EGSDS ER   +   E Q+AL ALA++   +IN+
Sbjct:   11 LIDKNALEEKKLDSNELTEFVKSSGLIDIGKKYNIVSIIGSQSTGKSTLLNYLFGTQFDVQNRQQSVGQTTVGIWISK--DVKNNVVVLDVEGSDSVERKSGENMVENQTALMALAMSHCFIINV 133          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_GIALA (Protein SEY1 homolog OS=Giardia lamblia GN=GL50803_32509 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16
Identity = 45/99 (45.45%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  258 SYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCVG----IEPFTIAMDLEGSDSRERGEDDT-TFEKQSALFALAIADIVLINM 539
            ++  V++ GPQSSGKSTL+N LF T+F+ MD   GR+QTTKGI +A+ V     + P  + +D EGSDSRER + +    E+    FA A++D+++IN+
Sbjct:   34 TFICVSVFGPQSSGKSTLLNDLFGTSFKTMDLSAGRTQTTKGI-MARAVDFQTKVAPRVLILDCEGSDSRERNQQEAQNIERHIGCFAAAVSDLLIINV 131          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_TRYBB (Protein SEY1 homolog OS=Trypanosoma brucei brucei GN=Tb10.61.2200 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16
Identity = 52/136 (38.24%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  195 EFNVDGLENFVRTTKLNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIAKCV--------------GIEPF-------TIAMDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            +F +  L     +  L   G++Y VV + G QSSGKSTL+N LF T F  MD    R QTTKG ++ + +              G +            +D EG+D  ERGED   FE+Q +LFAL++ADI++INM
Sbjct:   30 DFLISALAGKGSSDILYRTGVNYHVVGVFGGQSSGKSTLLNSLFQTEFMTMDEAHHRGQTTKGAFMTRAILDAQTHRKEREEGEGADLLKREKPQPLFVLDFEGTDGIERGEDQ-NFERQLSLFALSVADILIINM 164          
BLAST of CF503971 vs. ExPASy Swiss-Prot
Match: SEY1_LEIBR (Protein SEY1 homolog OS=Leishmania braziliensis GN=LbrM32_V2.0440 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.806e-13
Identity = 53/146 (36.30%), Postives = 69/146 (47.26%), Query Frame = 3
Query:  240 LNHCGLSYAVVAIMGPQSSGKSTLMNHLFHTNFREMDAFRGRSQTTKGIWIA----KCVGIEPFTIA------------------------------------------MDLEGSDSRERGEDDTTFEKQSALFALAIADIVLINM 539
            L   GL+Y VV + G QSSGKSTL+NHLF T+F+ +D    R QTTKG ++A       G+E   IA                                          +D EG+D  ERGED   FE+Q +LF L+I D ++INM
Sbjct:   48 LEAVGLNYHVVGVFGGQSSGKSTLLNHLFGTHFQMLDETVRRGQTTKGAFMALANTALAGLEASDIAVVAPRLAPSAADRSSRLNHAVAAAVTNNTTGGAPPTGSPLLVLDFEGTDGLERGEDQ-CFERQLSLFGLSIVDTLIINM 192          
The following BLAST results are available for this feature:
BLAST of CF503971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
SEY1_AJECN6.408e-1939.26Protein SEY1 OS=Ajellomyces capsulata (strain NAm1... [more]
SEY1_AJECG6.408e-1939.26Protein SEY1 OS=Ajellomyces capsulata (strain ATCC... [more]
SEY1_PICGU1.864e-1841.04Protein SEY1 OS=Pichia guilliermondii GN=SEY1 PE=3... [more]
SEY1_CRYHO7.085e-1847.47Protein SEY1 homolog OS=Cryptosporidium hominis GN... [more]
SEY1_COCIM9.253e-1838.13Protein SEY1 OS=Coccidioides immitis GN=SEY1 PE=3 ... [more]
SEY12_PARTE2.061e-1742.34Protein SEY1 homolog 2 OS=Paramecium tetraurelia G... [more]
SEY11_PARTE1.745e-1640.00Protein SEY1 homolog 1 OS=Paramecium tetraurelia G... [more]
SEY1_GIALA2.279e-1645.45Protein SEY1 homolog OS=Giardia lamblia GN=GL50803... [more]
SEY1_TRYBB6.631e-1638.24Protein SEY1 homolog OS=Trypanosoma brucei brucei ... [more]
SEY1_LEIBR1.806e-1336.30Protein SEY1 homolog OS=Leishmania braziliensis GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-459 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503971 ID=CF503971; Name=CF503971; organism=Citrus sinensis; type=EST; length=540bp
CCATTCTCACTATTCTCAGGAAACTTGATACCAAGACAAATATAAAAAAC
AAACATTAAAATCTAAATTGATTGATCCTCTAAATCAGTTCAATCGAAAC
CCTAGCTTTTCACTTGGCTCTACTGTGGGGGGCAATAAGGCTCATGGGCA
TGGCGGACGAATGCTGCTGCATGCAACTGATCGACGGCAATGGCGAATTC
AATGTGGATGGCCTTGAGAACTTCGTTAGAACCACTAAGCTCAACCACTG
CGGCCTCTCTTACGCCGTCGTCGCCATCATGGGCCCTCAAAGTAGCGGGA
AAAGTACTTTGATGAATCATCTTTTCCATACCAATTTCAGAGAGATGGAT
GCATTCAGGGGAAGGAGTCAAACAACTAAAGGCATTTGGATAGCGAAGTG
TGTTGGCATTGAGCCTTTCACAATTGCCATGGATTTGGAGGGTAGTGATA
GCAGGGAAAGAGGGGAGGACGACACAACATTTGAGAAACAAAGCGCCCTG
TTTGCTTTGGCAATTGCAGATATTGTGCTGATAAACATGT
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