CF504002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.146e-12 Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 2 Query: 62 IRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTP 244 ++YRGVR+RPWG++AAEIRDP +TR+WLGTF T G A+TNF TP Sbjct: 97 VKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTP 157
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.146e-12 Identity = 33/58 (56.90%), Postives = 36/58 (62.07%), Query Frame = 2 Query: 65 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 238 RYRGVR+RPWG++AAEIRDP K RVWLGTFD G KAK NFP Sbjct: 184 RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.721e-12 Identity = 32/57 (56.14%), Postives = 36/57 (63.16%), Query Frame = 2 Query: 68 YRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 238 YRGVR+RPWG++AAEIRDP K RVWLGTF+T G KAK NFP Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.721e-12 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 2 Query: 65 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTP 244 ++RGVR+RPWG++AAEIRDP ++ RVWLGTFDT G A+ NFP P Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPP 145
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12 Identity = 32/57 (56.14%), Postives = 36/57 (63.16%), Query Frame = 2 Query: 68 YRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 238 YRG+RKRPWG++AAEIRDP K RVWLGTF+T G KAK NFP Sbjct: 79 YRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12 Identity = 31/58 (53.45%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 65 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 238 +YRG+R+RPWG++AAEIRDP K +R WLGTFDT G KAK NFP Sbjct: 127 QYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFP 184
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12 Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 2 Query: 68 YRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 238 YRGVR+RPWG++AAEIRDP + TRVWLGTF+T G +AK NFP Sbjct: 136 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12 Identity = 34/58 (58.62%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 68 YRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 238 YRGVR+RPWG+YAAEIRDP KK RVWLGTFDT G+KA NFP Sbjct: 72 YRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 2 Query: 65 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPN 247 +YRG+R+RPWG++AAEIRDP + R+WLGTF T G+KAK NFP N Sbjct: 124 QYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEEN 184
BLAST of CF504002 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 2 Query: 68 YRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 238 YRGVR+RPWG++AAEIRDP +K TRVWLGTFDT G+KA NFP Sbjct: 145 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFP 202 The following BLAST results are available for this feature:
BLAST of CF504002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504002 ID=CF504002; Name=CF504002; organism=Citrus sinensis; type=EST; length=341bpback to top |