CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.210e-27
Identity = 64/119 (53.78%), Postives = 78/119 (65.55%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCP-STGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + C  F+ RIYN TNID +FA  RQ  CP S GG++NLAP D  TP  FD  Y+  L+  RGLL SDQ LFNGGS D LV+TYS N   F + FA +++KM  I+ LTG  G+I
Sbjct:   32 HTIGQSECQFFKTRIYNDTNIDTNFATSRQANCPFSAGGETNLAPLDSLTPNRFDNNYYKDLVSNRGLLHSDQVLFNGGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEI 150          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.695e-27
Identity = 65/120 (54.17%), Postives = 79/120 (65.83%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGG--DSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A+C  FRNRIYNA+NID  FA  ++R CP+T G  D+  A  D  +P  FD  ++  LL K+GLL SDQ LFN G TD LV  YS N  AF   FA +MIKMG+I+ LTG+ GQI
Sbjct:  189 HTIGRAQCVTFRNRIYNASNIDTSFAISKRRNCPATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQI 308          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.637e-26
Identity = 60/120 (50.00%), Postives = 82/120 (68.33%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIY-NATNIDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFN-GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +G A+C  F+ R+Y N+++ID  F+  R+R CP  GGD+ LAP D  TP +FD  Y+ +L+QK+GLL SDQ LF  G STD +V  YS N   F++ F+ +MIKMG+I  LTG+ GQI
Sbjct:  188 HTLGQAQCLTFKGRLYDNSSDIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQI 307          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.637e-26
Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNA-TNIDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A+CS FR RIY   TNI+  FA   +  CP +GG++NLA  D  TP  FD  Y+++LL ++GLL SDQ LFN  +TD  V+ ++ N  AFS+ F  +MIKMGNI  LTG +GQI
Sbjct:  185 HTIGKAQCSNFRTRIYGGDTNINTAFATSLKANCPQSGGNTNLANLDTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNTVRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQI 303          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.302e-25
Identity = 57/118 (48.31%), Postives = 80/118 (67.80%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A+CS+F + IYN TNI+  FA   +  CP  G  + LAP D T P  FD  Y+++LL ++GLL SDQ LFN GSTD  V++++ +  AF++ FA +M+KMGN++  TG +GQI
Sbjct:  195 HTIGQAQCSSFNDHIYNDTNINSAFAASLRANCPRAGSTA-LAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQI 311          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.618e-25
Identity = 58/118 (49.15%), Postives = 76/118 (64.41%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A+CS+F   IYN TNI+  FA   +  CP +GG S+LAP D  TP  F   Y+ +LL ++GLL SDQ LFN GSTD  V  ++ +  AF++ F  +M+KMGN+  LTG  GQI
Sbjct:  195 HTIGQAQCSSFNGHIYNDTNINAAFATSLKANCPMSGG-SSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQI 311          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.618e-25
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-NIDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKG 345
            H +G ARC  FR RIYN+T  I+P+F +   + CP TG D+ L P D  TP +FD  Y+ +L+  RGLLISDQ LFN  STD +V  Y  N   F+A FA +M+KM  I V+TG  G
Sbjct:  195 HTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSG 311          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.618e-25
Identity = 58/117 (49.57%), Postives = 74/117 (63.25%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-NIDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKG 345
            H +G ARC  FR RIYN+T  I+P+F +   + CP TG D+ L P D  TP +FD  Y+ +L+  RGLLISDQ LFN  STD +V  Y  N   F+A FA +M+KM  I V+TG  G
Sbjct:  195 HTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSG 311          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22
Identity = 58/121 (47.93%), Postives = 76/121 (62.81%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNA-TNIDPDFAKERQRTCPST--GGDSNLAPFDPTPL-TFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A+CS FR RIY   TNI+  +A   +  CP T   GD +LA  D T   TFD  Y+++L+ ++GLL SDQ LFN  +TD  V+ ++ N  AFS+ F  +MIKMGNI   TG +GQI
Sbjct:  186 HTIGQAQCSTFRARIYGGDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQI 306          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.886e-21
Identity = 58/127 (45.67%), Postives = 73/127 (57.48%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-NIDPDFAKER------QRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNG--GSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG ARC+ F+ R+YN   N  PD   ER      +  CP TGGD+N++P D  +P  FD  YF  LL  +GLL SD+ L  G  G T  LVK Y+ + + F   FA SM+ MGNI  LTG  G+I
Sbjct:  212 HTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQQFAKSMVNMGNIQPLTGFNGEI 338          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PERX_LUPPO1.210e-2753.78Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]
PER67_ARATH2.695e-2754.17Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER4_ARATH6.637e-2650.00Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER1_WHEAT6.637e-2651.26Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER66_MAIZE4.302e-2548.31Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER42_MAIZE5.618e-2549.15Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER2_ZINEL5.618e-2549.57Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL5.618e-2549.57Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER1_HORVU1.530e-2247.93Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER9_ARATH2.886e-2145.67Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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