CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 7.107e-20
Identity = 56/126 (44.44%), Postives = 77/126 (61.11%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-NIDPD------FAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDG-LVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+RC++FR R+YN + N  PD      FA   ++ CP +GGD  L+  D  +  +FD  YF +L++ +GLL SDQ LF+       LVK Y+ +   F   FA SMIKMGNI+ LTG+ G+I
Sbjct:  197 HTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLDIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEI 322          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.107e-20
Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-NIDPD------FAKERQRTCPSTGGDSNLAPFDPTPL-TFDGKYFSSLLQKRGLLISDQALFNGGSTDG-LVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+RC++FR R+YN + N  PD      +A   ++ CP +GGD NL+  D      FD  YF +L++  GLL SD+ LF+       LVK Y+ + + F   FA SMIKMGNI+ LTG+ G+I
Sbjct:  203 HTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEI 328          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.212e-19
Identity = 59/126 (46.83%), Postives = 73/126 (57.94%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-NIDPD------FAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNGG-STDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG +RC  FR R+YN T N DPD      +A   Q+ CP +G D NL   D  TP  FD  Y+ +L+  RGLL SD+ LF     T  +VK Y+ N  AF   FA SM+KMGNI+ LTG  G+I
Sbjct:  208 HTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEI 333          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19
Identity = 53/126 (42.06%), Postives = 74/126 (58.73%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNA-------TNIDPDFAKERQRTCPSTGGDSNLAPFDPTPL-TFDGKYFSSLLQKRGLLISDQALFNGGSTDG-LVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+RC++FR R+YN        T ++  +A   ++ CP +GGD NL+  D      FD  YF +L++  GLL SDQ LF+       LVK Y+ + + F   FA SMIKMG I+ LTG+ G+I
Sbjct:  202 HTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEI 327          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.527e-19
Identity = 56/126 (44.44%), Postives = 76/126 (60.32%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-NIDPD------FAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNGGS-TDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG +RC++FR R+YN + N  PD      +A   ++ CP +GGD  L   D  TP  FD  YF +L+  +GLL SD+ LF     +  LV+ Y+ N +AF   FA SM+KMGNI+ LTG KG+I
Sbjct:  200 HTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEI 325          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.135e-17
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT--------NIDPDFAKERQRTCPSTGGDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    NR++N +        +I+P+F +  +R CP  G  +  A  DPT P +FD  YF +L   RG++ SDQ LF+  G  T  LV  ++ N   F   FA SMIKMGN+ +LTG +G+I
Sbjct:  194 HTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEI 321          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.482e-17
Identity = 54/127 (42.52%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNI-DPD------FAKERQRTCPSTGGDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G A+C  F  R++N +N  +PD      +    Q+ CP  G    +   DPT P TFD  YFS+L   RGLL SDQ LF+  G  T  +V  +S N  AF   F  SMI MGNI+ LTG+ G+I
Sbjct:  193 HTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQGGSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEI 319          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.936e-17
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN--ATN-----IDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G A+C     R+YN   TN     ++P +  E +R CP  G  + L  FD  TP TFD +Y+++LL  +GL+ SDQ LF+  G  T  LV  YS N   F   F ++MI+MGN+  LTG +G+I
Sbjct:  199 HTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEI 325          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.302e-17
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRI-YNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +G ARCS+F+ R+    +++D  FA    +TC  + GD+   PFD T   FD  YF++L  K G+L SDQ LFN   T  LV  Y+LN   F   F  +M KM N++V  G++G++
Sbjct:  191 HTLGVARCSSFKARLTVPDSSLDSTFANTLSKTC--SAGDNAEQPFDATRNDFDNAYFNALQMKSGVLFSDQTLFNTPRTRNLVNGYALNQAKFFFDFQQAMRKMSNLDVKLGSQGEV 306          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.355e-17
Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT---NIDPDF----AKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G ARC  F NR++N +   N DP          Q+ CP  G  S +   D  TP  FD  YF++L    GLL SDQ LF+  G ST  +V +++ N   F   FA SMI MGNI+ LTG+ G+I
Sbjct:  199 HTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEI 325          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PER49_ARATH7.107e-2044.44Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER15_ARATH7.107e-2043.65Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER36_ARATH1.212e-1946.83Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER14_ARATH1.583e-1942.06Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER72_ARATH3.527e-1944.44Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER58_ARATH1.135e-1739.06Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER15_IPOBA1.482e-1742.52Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER23_ARATH1.936e-1740.94Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER47_ARATH3.302e-1740.68Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER53_ARATH7.355e-1741.73Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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