CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 9.606e-17
Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN--ATN-----IDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G ARC     R+YN   TN     ++P +  + +R CP  G  + L  FD  TP TFD +++++L   +GL+ SDQ LF+  G  T  LV  YS N  +F   FA++MI+MGN+  LTG +G+I
Sbjct:  170 HTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPRNGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEI 296          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.639e-16
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNID-PD------FAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G ARC  F NR++N +  + PD           Q+ CP  G  S +   D  TP  FD  YF++L    GLL SDQ LF+  G +T  +V +++ N   F   FA SMI MGNI+ LTG+ G+I
Sbjct:  169 HTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEI 295          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.795e-16
Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN--ATN-----IDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G A+C     R+YN   TN     +DP +  + +  CP  G  + L  FD  TP TFD +Y+++L   +GL+ SDQ LF+  G  T  LV  YS N  AF   F ++MI+MGN+  LTG +G+I
Sbjct:  199 HTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQNGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEI 325          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.795e-16
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPD----FAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A C +F +R+Y   N DP     FA   +RTCP+    +       +P  FD KY+  L+ ++GL  SDQ LF    T G+V++++++ + F   F  +MIKMG ++VLTG +G+I
Sbjct:  213 HTIGIAHCPSFTDRLY--PNQDPTMNQFFANSLKRTCPTANSSNTQVNDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEI 331          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.226e-16
Identity = 51/130 (39.23%), Postives = 65/130 (50.00%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFK-----AFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + C  F NR++N          IDP F    Q  CP   G +N    D  +   FD  YFS+L  +RG+L SDQAL+N  ST   V+ Y L  +      F+  F  SM+KM NI V TG  G+I
Sbjct:  194 HTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQNTGAANRVALDTGSQFKFDTSYFSNLRNRRGVLQSDQALWNDPSTKSFVQRY-LGLRGFLGLTFNVEFGKSMVKMSNIGVKTGTDGEI 322          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.132e-16
Identity = 52/128 (40.62%), Postives = 72/128 (56.25%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN---ATNIDPDFA------KERQRTCPST-GGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGFA+C   ++R++N   +   DP+ A       + + TCP+    DS LA  D  + + FD  Y+ +L+   GLL SDQ L    +   LVK+YS N   FS  FA SM+KMGNI V+TG+ G I
Sbjct:  215 HTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVI 342          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.387e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN------IDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A C  FRNR++N T       IDP F  + Q  CP  G  S     D  +  T+D  Y+++L + RG+L SDQ L+   +T  +V+        F+  FA SM++M NI V+TG  G+I
Sbjct:  197 HTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEI 320          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.387e-15
Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT---NIDPDF----AKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C  F NR++N     N DP          Q+ CP  G ++ +   D  TP  FD  YF++L    GLL SDQ LF+  G +T  +V +++ N   F   F  SMIKMGNI+ LTG+ G+I
Sbjct:  200 HTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEI 326          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.387e-15
Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN--ATN-----IDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G A+C     R+YN   TN     ++P +  E +R CP  G  + L  FD  TP  FD +Y+++L   +GL+ SDQ LF+  G  T  LV  YS +   F   F ++MI+MGN+  LTG +G+I
Sbjct:  199 HTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQNGNGTVLVNFDVVTPDAFDSQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNQYSSDMSVFFRAFIDAMIRMGNLRPLTGTQGEI 325          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.812e-15
Identity = 46/125 (36.80%), Postives = 65/125 (52.00%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN---ATNIDP----DFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFA C+   NR+YN     N+DP    D+  E + +CP           DP TP  FD  Y+ +L Q +GL  SDQ LF    +   V  ++ N + F+  F +SMIK+G + V TG+ G I
Sbjct:  197 HTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNIDPRVAINMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNI 321          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PERE5_ARMRU9.606e-1740.16Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PERA2_ARMRU1.639e-1640.16Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER3_ARMRU2.795e-1640.16Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER12_ARATH2.795e-1638.02Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER2_ARAHY6.226e-1639.23Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER10_ARATH8.132e-1640.63Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER71_ARATH1.387e-1537.90Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER54_ARATH1.387e-1538.58Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER22_ARATH1.387e-1538.58Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER51_ARATH1.812e-1536.80Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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