CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.090e-15
Identity = 49/125 (39.20%), Postives = 61/125 (48.80%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT---NIDPD----FAKERQRTCPSTGGDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFA C    NRIYN      +DP     +AKE Q  CP T         DPT P  FD  YF +L Q +GL  SDQ LF  G +   V  ++ N  AF+  F  +M K+G + V T   G I
Sbjct:  197 HTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFTDGRSKPTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNI 321          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15
Identity = 47/125 (37.60%), Postives = 64/125 (51.20%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN---ATNIDP----DFAKERQRTCPSTGGDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFA C+   NRIY     T +DP    D+  E + +CP           DPT P  FD  Y+ +L Q +GL  SDQ LF    +   V  ++ N + F+  F NSMIK+G + V TG+ G I
Sbjct:  197 HTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNI 321          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.036e-15
Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-------NIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSL---NFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + C+   +R+YN T       +++P + +E +R CP T   ++L     + LTFD  YF  + QK+GL  SD  L +   T   V+T ++    F +F+  F++SM+K+G + +LTG  G+I
Sbjct:  191 HTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEI 317          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.271e-15
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNI 321
            H +GF+RC+     +  +TN++ + +   Q TCP++  D+ L   DP+P TFD KYF  L++ +GLL SDQ L    +T   V+ Y     AF   FA +M+KM N+
Sbjct:  228 HTVGFSRCAV----LCTSTNLNQNRSATLQCTCPASANDTGLVGLDPSPGTFDKKYFEELVKGQGLLFSDQELMQSNATVTAVRRYRDATGAFLTDFAAAMVKMSNL 330          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.271e-15
Identity = 50/126 (39.68%), Postives = 67/126 (53.17%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYN---ATNIDPD----FAKERQRTCPSTGGDSNLA-PFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGFA C     RIYN    T IDP     +  + ++ CP  G D  +A   DPT P TFD  YF +L Q +GL  SDQ LF    +   V +++ +  AF   F  ++ K+G + VLTGN G+I
Sbjct:  193 HTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCP-IGVDVRIAINMDPTSPRTFDNAYFKNLQQGKGLFTSDQILFTDQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEI 317          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.271e-15
Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFARCS     +  + N++P  A + Q  C +T  DS+L   D TP  FD  Y+ +L   +G++ SDQ L    +T G V TYS N   F   FA +MIKMGN+    G + +I
Sbjct:  238 HTVGFARCST----VCTSGNVNP--AAQLQCNCSATLTDSDLQQLDTTPAVFDKVYYDNLNNNQGIMFSDQVLTGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEI 348          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.884e-15
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-------NIDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +G A C  F +R+ N         ++DP  A   + TC   GG + L    P TP++FD  +F  + +++G+L+ DQ + +  +T G+V  Y+ N + F   FA +M+KMG ++VLTG+ G+I
Sbjct:  189 HTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEI 313          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.174e-14
Identity = 52/131 (39.69%), Postives = 67/131 (51.15%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQR----------TCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNG---GSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG ARC +F+ RI         +  E +R           C  +  D+ L+P D  TP  FD  YF +LL+ RGLLISD  L +    G     V  Y++N   F   F  SM+KMGNINVLTG +G+I
Sbjct:  197 HTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEI 327          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.534e-14
Identity = 49/128 (38.28%), Postives = 66/128 (51.56%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSN-LAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G ARC  F  R++N          +D  F +  Q  CP  G + N     D  TP  FD  YF++L   +GLL +DQ LF+  G +T  +V  Y+ +   F   F +SMIK+GNI+ LTG  GQI
Sbjct:  189 HTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQI 316          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.003e-14
Identity = 46/124 (37.10%), Postives = 63/124 (50.81%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN------IDPDFAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A C    NRI+N++       +D  F  + QR CP  G  S     D  +  TFD  YF +L + RG+L SD  L+   +T  +V+ +      F+  FA SM+KM NI V TG  G+I
Sbjct:  188 HTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDLDTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPATRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEI 311          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PER73_ARATH3.090e-1539.20Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER50_ARATH4.036e-1537.60Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER1_ARATH4.036e-1533.86Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PERN_IPOBA5.271e-1538.32Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER45_ARATH5.271e-1539.68Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER2_SOLLC5.271e-1539.32Suberization-associated anionic peroxidase 2 OS=So... [more]
PER28_ARATH6.884e-1534.40Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER20_ARATH1.174e-1439.69Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PERX_TOBAC1.534e-1438.28Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER62_ARATH2.003e-1437.10Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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