CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.417e-14
Identity = 53/130 (40.77%), Postives = 73/130 (56.15%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNI-DPDFAKER------QRTCPSTGGDSNL-APFD-PTPLTFDGKYFSSLLQKRGLLISDQALFNG----GSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G A+C+ F NR++N T + +PD   E       Q  CP  GG+SN+ AP D  T  TFD  YF +LL+ +GLL SDQ LF+      +T  LV+ YS +   F   F  +MI+MGNI+   G  G++
Sbjct:  193 HTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCP-LGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEV 319          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.462e-14
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       ++  + +  ++ CP  G  S L  FD  TP  FD KY+ +L +++GL+ SDQ LF   N   T  LV++Y+   + F   F  +M +MGNI  LTG +G+I
Sbjct:  179 HTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEI 306          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       ++  + +  +  CP  G  S L  FD  TPL FD KY+ +L +++GL+ SDQ LF   N   T  LV+ Y+   + F   F  +M +MGNI   TG +GQI
Sbjct:  201 HTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQI 328          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.298e-13
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT---NIDPD----FAKERQRTCPSTG--GDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINV 327
            H IGF+ CS+F +R+ N +   +IDP     FA+  ++ CP T   G +     D T   FD  Y+  +L  +G+  SDQAL     T  +V+T++ + KAF   FA SM+K+GN  V
Sbjct:  191 HTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDSTSSVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKLGNFGV 308          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.696e-13
Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKE-RQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGST-DGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + CS+F NR+YN T        +D ++A   + R CPS   +  +   DP +  TFD  Y+  +L++RGL  SD AL    +T   + +  + +  +F + FA SM KMG INV TG+ G +
Sbjct:  191 HTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVV 317          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFARCS     +  + N++P  A + Q  C +T  DS+L   D TP  FD  Y+ +L   +G++ SDQ L    +T G V  YS +   F   FA +MIKMG++    G + +I
Sbjct:  238 HTVGFARCST----VCTSGNVNP--AAQLQCNCSATLTDSDLQQLDTTPTMFDKVYYDNLNNNQGIMFSDQVLTGDATTAGFVTDYSNDVSVFLGDFAAAMIKMGDLPPSAGAQLEI 348          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFARCS     +  + N++P  A + Q  C +T  DS+L   D TP  FD  Y+ +L   +G++ SDQ L    +T G V  YS +   F   FA +MIKMG++    G + +I
Sbjct:  239 HTVGFARCST----VCTSGNVNP--AAQLQCNCSATLTDSDLQQLDTTPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEI 349          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       ++  + +  ++ CP  G  S L  FD  TP  FD KY+ +L +++GL+ SDQ LF   N   T  LV++++   + F   F  +M +MGNI  LTG +G+I
Sbjct:  198 HTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEI 325          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIY--NATNIDPDFAKERQRTCPSTGGDSNLAPFDP--TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+ C  F NR+   N+T  +P FA   ++ C ++  D  ++ F+   TP  FD  YF ++ +  GLL SD  LF+   T   V+ Y+ +   F   FA +M K+    VLTG +G+I
Sbjct:  200 HTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEI 320          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLA-PFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + CS+F NR+YN          +DP +A   +  CP    ++NL  P +P+ P   D  Y+  +L+ RGL  SDQ L    +T   V+  + N   +   FA++M+KMG + VL G  GQI
Sbjct:  228 HTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLVVPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQI 353          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PER59_ARATH3.417e-1440.77Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER1C_ARMRU4.462e-1435.16Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER33_ARATH5.828e-1435.94Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER66_ARATH1.298e-1337.29Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER3_ARATH1.696e-1336.22Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PERX_SOLTU2.215e-1336.75Suberization-associated anionic peroxidase OS=Sola... [more]
PER1_SOLLC2.215e-1336.75Suberization-associated anionic peroxidase 1 OS=So... [more]
PER1B_ARMRU2.215e-1334.38Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER63_ARATH2.892e-1335.54Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER5_VITVI2.892e-1335.71Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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