CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 41/125 (32.80%), Postives = 70/125 (56.00%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFDPTPL-TFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + C+ F NR++N +        +DP +A++  + C     D+ +   D T   TFD  Y+ +L+ ++GL  SDQALFN  S+   V  ++ N + F + F+++M  +G + V  GN+G+I
Sbjct:  199 HTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSDPNPDA-VVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEI 322          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 44/128 (34.38%), Postives = 67/128 (52.34%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       +D  +    ++ CP  G  S L  FD  TP  FD KY+ +L + +GL+ SDQ LF   +   T  LV+ Y+     F   FA +MI+M +++ LTG +G+I
Sbjct:  192 HTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEI 319          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 46/125 (36.80%), Postives = 61/125 (48.80%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRI--YNATN-IDPD----FAKERQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFA C     RI  +N  N +DP     +A E Q+ CP           DP TP TFD  YF +L Q +GL  SDQ LF  G +   V  ++ N  AF+  F  +M K+G + V   + G I
Sbjct:  197 HTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNI 321          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       ++  + +  +  CP  G  S L  FD  TP  FD KY+ +L +++GL+ SDQ LF   N   T  LV+ Y+   + F   F  +M +MGNI   TG +GQI
Sbjct:  200 HTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDFDLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQI 327          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.777e-13
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       +D  +    ++ CP  G  S L  FD  TP  FD KY+ +L + +GL+ SDQ LF   +   T  LV+ Y+     F   F  +MI+MGN++  TG +G+I
Sbjct:  194 HTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEI 321          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.777e-13
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       ++  + +  +  CP  G  S L  FD  TP  FD KY+ +L +++GL+ SDQ LF   N   T  LV++++ + + F   F  +M +MGNI  LTG +GQI
Sbjct:  200 HTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQI 327          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.777e-13
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG  RC +   R+YN +        ++P + K+  + CP  G ++     D TP  FD +YF  L+  RG L SDQ L+    T   VK +S +   F   FA  M+K+G++   +G  G+I
Sbjct:  190 HSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEI 311          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.933e-13
Identity = 46/122 (37.70%), Postives = 62/122 (50.82%), Query Frame = 1
Query:    1 HPIGFARCSAFRNR---IYNATNIDPDFAKERQRTCPSTGGDSNLAP-FDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G A C AF +R   + +   ID  FA   +  C        L    D  TP  FD KY+  L+ ++GL  SDQ L +  +T  +   +SLN  AF   FA SM KM N+++LTG KG+I
Sbjct:   24 HTFGVAHCPAFEDRSSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEI 145          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 4.933e-13
Identity = 45/125 (36.00%), Postives = 64/125 (51.20%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN---IDPD----FAKERQRTCPSTGGDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGFA C  F  RIYN +    IDP     +A + ++ CP           DPT P TFD  YF +L +  GL  SDQ LF+   +   V +++ +   F   F +++ K+G + V TGN G+I
Sbjct:  191 HTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINMDPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEI 315          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 8.415e-13
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G  +C    +R+YN +N       ++  + +  +  CP  G  + L  FD  TP  FD KY+ +L + +GL+ +DQ LF   N   T  LV+ Y+   + F   F  +M +MGNI  LTG +GQI
Sbjct:  199 HTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGTQKFFNAFVEAMNRMGNITPLTGTQGQI 326          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PER55_ARATH2.892e-1332.80Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER37_ARATH2.892e-1334.38Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER35_ARATH2.892e-1336.80Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER34_ARATH2.892e-1335.16Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER2_ARMRU3.777e-1334.38Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1A_ARMRU3.777e-1335.16Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER17_ARATH3.777e-1333.06Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER2_HORVU4.933e-1337.70Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER16_ARATH4.933e-1336.00Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER32_ARATH8.415e-1334.38Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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