CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.435e-12
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNI 321
            H IGFARC      +  +T I+P         C  T   + L   DPTP T+D +YFS ++  +GLL SD  L  G +T+  V+ Y     AF   FA +M+KM N+
Sbjct:  227 HTIGFARCPL----LCISTFINPARVSTLNCNCSGTVNATGLVGLDPTPTTWDQRYFSDVVNDQGLLFSDNELLKGNTTNAAVRRYRDAMGAFLTDFAAAMVKMSNL 329          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.435e-12
Identity = 43/122 (35.25%), Postives = 60/122 (49.18%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT---NIDPDFAKERQRTCPSTGGDSNLAPFDP--TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+ C  F +R+Y +     I+P FA   +  C +   D  +A F+   TP  FD  YF +L +  GLL SD  L    ST   V  Y+ N  AF   FA +M K+G + V     G++
Sbjct:  201 HTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEV 322          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.448e-12
Identity = 42/125 (33.60%), Postives = 65/125 (52.00%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN------IDPDFAKERQRTCPSTGGDSNLAPFDP--TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+ C  F +RI+N ++      ++P +A E ++ C +   D  ++ F+   TP  FD  Y+ +L    GLL SD A+     T  LV  Y+ +  AF   FA +M K+   NV TG  G++
Sbjct:  190 HTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEV 314          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.198e-12
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTC-----PSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +G A CS F++RI +   +D     + +++C     PS   D N      TP   D + +  ++Q+R +L  D  L   GST  +V  ++ N K F   FA +M KMG I VLTG+ G+I
Sbjct:  187 HTVGVAHCSLFQDRIKDP-KMDSKLRAKLKKSCRGPNDPSVFMDQN------TPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEI 301          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.198e-12
Identity = 45/123 (36.59%), Postives = 62/123 (50.41%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-------NIDPDFAKERQRTCPSTGGDSNLA-PFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNK 342
            H IGFA C  F  R+Y+         ++D    KE + +CP +GG S +  P D T P  FD  YF+ L    GLL SDQALF    T  +    + + + F   F ++M KMG+I V  G +
Sbjct:  212 HTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMARDKQKFLKAFGDAMDKMGSIGVKRGKR 334          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.176e-12
Identity = 46/129 (35.66%), Postives = 61/129 (47.29%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFDPTPLT-FDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTY----SLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG A C+  R+R++N  +       ID  F  + +  CP  G  S     D   +  FD  YFS+L   RG+L SDQ L+   ST   V+ +     L    F   F  SM+KM NI V TG  G+I
Sbjct:  194 HTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQNGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEI 322          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.455e-12
Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAPFDPTPL-TFDGKYFSSLLQKRGLLISDQALFNG----GSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G A+C  F NR++N T        ++     + Q  CP  G  +  AP D      FD  YF +LL+ +GLL SDQ LF+      +T  LV+ YS +   F   F  SMI+MG++  + G  G++
Sbjct:  193 HTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEV 319          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.455e-12
Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNI---DPDFAKE-----RQRTCPSTGGDSNLAPFDP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKA-FSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + CS+F NR++N T +   DP    E     + R C S   ++     DP +  TFD  Y+  +L++RGL  SD AL    +    VK ++   +  F A F+NSM KMG I V TG+ G+I
Sbjct:  192 HTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEI 318          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 5.455e-12
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT------NIDP----DFAKERQRTCPSTGGDSNLAPFDPTPL-TFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLN-FK-AFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG + C +F +R+YN T      +IDP     +    +  C S   ++ L   DP    TFD  YF ++ ++RGL  SD  L   G T   V+ ++   +K  F A FA SM+KMG + VLTG++G+I
Sbjct:  189 HTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEI 318          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12
Identity = 46/123 (37.40%), Postives = 63/123 (51.22%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPD----FAKERQRTCPSTGGDSNLAPF-DP-TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+ C  F NRI+    +DP+    FA   +  C +   +  +A F DP TP  FD  YF +L +  GLL SD  LF   ST   V+ Y+ N  AF   FA +M K+G + V     G++
Sbjct:  194 HTIGFSHCKEFSNRIF--PKVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEV 314          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PERA_IPOBA1.435e-1237.38Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER65_ARATH1.435e-1235.25Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER6_ARATH2.448e-1233.60Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER8_ARATH3.198e-1234.43Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER19_ARATH3.198e-1236.59Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PERN1_TOBAC4.176e-1235.66Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PERN_ARMRU5.455e-1234.11Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER39_ARATH5.455e-1237.01Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER1_ORYSJ5.455e-1236.15Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER41_ARATH7.124e-1237.40Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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