CF504009

Overview
NameCF504009
Unique NameCF504009
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.124e-12
Identity = 41/128 (32.03%), Postives = 65/128 (50.78%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNA-------TNIDPDFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQALF---NGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G ++C    +R+YN          +D  +    ++ CP  G  S L  FD  TP  FD KY+ +L + +GL+ SDQ LF   +   T  LV+ Y+     F   F  ++I+M +++ LTG +G+I
Sbjct:  192 HTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEI 319          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 44/125 (35.20%), Postives = 61/125 (48.80%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-------NIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLV-KTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IG   C    NR+YN T       N+D ++A + +  C  T   + L     +  TFD  YF  + Q+RGL  SD AL +   T   V K+ + +   F   F  SM+KMG I VLTG  G++
Sbjct:  197 HTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPTDTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEV 321          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11
Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNID----PDFAKERQRTCPSTGGDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFN--GGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H  G +RC  F  R+ N +N D    P +A++ ++ C S  G       DPT P  FD  Y+++L    G L SDQ L +  G  T  +V  ++ +   F   F  SMI MGNI  LTGN+G+I
Sbjct:  164 HTFGKSRCQFFDRRL-NVSNPDSTLNPRYAQQLRQACSS--GRDTFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEI 284          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.587e-11
Identity = 48/127 (37.80%), Postives = 62/127 (48.82%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNAT-------NIDPDFAKERQRTCPSTG---GDSNLAPFDPT-PLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLT-GNKG 345
            H IG A C  F  R+ N T       +++P +A   +  C         S +   DPT PL FD  YF SLL+ +GL  SD AL    S   +   +  N  AF A F  SMIKM +I VLT G++G
Sbjct:  214 HTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDPSAAHIASVFQ-NSGAFLAQFGRSMIKMSSIKVLTLGDQG 339          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.073e-11
Identity = 40/124 (32.26%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRI--YNAT-----NIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +G   C  F +RI  +  T     ++DP      + TC ++   +  A    +PL FD ++F  + ++RG+L  DQ L +   T G+V  Y+ N   F   F  +M+KMG ++VLTG  G+I
Sbjct:  185 HTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTCRNS---ATAALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYANNNAFFKRQFVRAMVKMGAVDVLTGRNGEI 305          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.707e-11
Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATN-------IDPDFAKERQRTCPSTGGDSNLAP-FDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +GFA CS+F+NR++           ++P FA   +  CP+     N     D T  +FD  Y+  L+Q + L  SD++L    ST  LV  Y+ + + F   F  SMIKM +I   +GN  ++
Sbjct:  188 HTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGSNMDGTVTSFDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEFERAFVKSMIKMSSI---SGNGNEV 309          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11
Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDPDFAKERQRTCPSTGGDSNLAPFDPTPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H +G A CS F++R+ +   ++P      +R C S    +       T  T D   +  + ++RG+L  DQ L    ST G+V  Y+ +   F   FA +++KMG I VLTG  G+I
Sbjct:  187 HSVGVAHCSLFQDRLSDRA-MEPSLKSSLRRKCSSPNDPTTFLD-QKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEI 301          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11
Identity = 40/120 (33.33%), Postives = 60/120 (50.00%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRI-YNATNIDPDFAKERQRTCPSTGGDSNLAPFDP--TPLTFDGKYFSSLLQKRGLLISDQALFNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNINVLTGNKGQI 351
            H IGF+ C  F  R+  N T  +P FA   ++ C +   D  ++ F+   TP  FD  Y+ +L +  GLL SD  L++   T   V  Y+ N   F   FA +M K+    + TG +G+I
Sbjct:  189 HSIGFSHCKEFVGRVGRNNTGYNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEI 308          
BLAST of CF504009 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 1
Query:    1 HPIGFARCSAFRNRIYNATNIDP-------DFAKERQRTCPSTGGDSNLAPFD-PTPLTFDGKYFSSLLQKRGLLISDQAL-FNGGSTDGLVKTYSLNFKAFSAGFANSMIKMGNI 321
            H +G ARC++F  R+       P       +F +  Q+ C + G    +   D  TP TFD +Y+ +LL   GLL SDQAL      T  +V+TY+ +   F   F N+M+KMG I
Sbjct:  217 HTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVETYATDQSVFFEDFKNAMVKMGGI 332          
The following BLAST results are available for this feature:
BLAST of CF504009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PER38_ARATH7.124e-1232.03Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER56_ARATH1.215e-1135.20Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER2_CUCSA1.215e-1137.10Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER24_ARATH1.587e-1137.80Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER57_ARATH2.073e-1132.26Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER64_ARATH2.707e-1132.80Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER44_ARATH4.618e-1132.48Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER31_ARATH6.031e-1133.33Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER40_ARATH7.876e-1135.34Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-497 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504009 ID=CF504009; Name=CF504009; organism=Citrus sinensis; type=EST; length=469bp
CACCCTATTGGCTTTGCTCGGTGCAGTGCCTTTCGAAACCGCATATACAA
CGCAACAAACATCGACCCCGACTTTGCTAAAGAGCGCCAAAGGACTTGCC
CGAGCACAGGAGGAGACTCGAACCTCGCACCTTTTGACCCAACGCCATTA
ACCTTCGATGGCAAATATTTTTCTAGTCTGTTGCAGAAACGAGGGCTACT
TATCTCAGATCAAGCACTTTTCAATGGGGGCTCAACCGATGGGCTTGTTA
AAACTTATAGCCTTAATTTCAAAGCCTTCTCTGCTGGTTTTGCAAACTCT
ATGATCAAGATGGGGAACATTAACGTTTTGACAGGGAATAAAGGTCAAAT
TCGTTCGAACTGCAGGAGGGTGAACAACTAAAGACGTTGTCGTTTTGGGT
TTTTATTTGAAATGAATTTGTGTGTTCAAGAATTGAGTGAAAATTGTTTT
AAAACACCATGTGCCGTTT
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