CF504016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ESCF3 (Bifunctional polymyxin resistance protein arnA OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=arnA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.758e-13 Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG F ED S I G I K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCTDKFFD---------------EDHSNLIVGPINKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_AERS4 (Bifunctional polymyxin resistance protein arnA OS=Aeromonas salmonicida (strain A449) GN=arnA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.758e-13 Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 21 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 C Y K I P S + + ED S I G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 422 CVKYNKRI--IFPSTSEVYGMCDDHSFDEDESRLIVGPIHKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLD 501
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PHOLL (Bifunctional polymyxin resistance protein arnA OS=Photorhabdus luminescens subsp. laumondii GN=arnA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.214e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDDSRLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEAE (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa GN=arnA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.115e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 433 STSEVYG------------MCQDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD 500
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEAB (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=arnA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.115e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 433 STSEVYG------------MCQDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD 500
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA8 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain LESB58) GN=arnA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.115e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 433 STSEVYG------------MCQDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD 500
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA7 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain PA7) GN=arnA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.115e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 433 STSEVYG------------MCQDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD 500
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSE14 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=arnA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.115e-13 Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QD ++ ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 434 STSEVYG------------MCQDASF---NEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD 501
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECO27 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.060e-12 Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQLI+R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLIDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SHISS (Bifunctional polymyxin resistance protein arnA OS=Shigella sonnei (strain Ss046) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499 The following BLAST results are available for this feature:
BLAST of CF504016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504016 ID=CF504016; Name=CF504016; organism=Citrus sinensis; type=EST; length=323bpback to top |