CF504016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECO5E (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECO57 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O157:H7 GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECO55 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli (strain 55989 / EAEC) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECO45 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECO24 (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEPF (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain Pf0-1) GN=arnA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.361e-12 Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QD + ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D Sbjct: 434 STSEVYG------------MCQDKHF---DEDRSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD 501
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SALTY (Bifunctional polymyxin resistance protein arnA OS=Salmonella typhimurium GN=arnA PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12 Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 15 STCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG T SF ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 431 STSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SALTI (Bifunctional polymyxin resistance protein arnA OS=Salmonella typhi GN=arnA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12 Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 15 STCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG T SF ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 431 STSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SALSV (Bifunctional polymyxin resistance protein arnA OS=Salmonella schwarzengrund (strain CVM19633) GN=arnA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12 Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 15 STCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG T SF ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 431 STSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SALPK (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12 Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 15 STCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG T SF ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 431 STSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499 The following BLAST results are available for this feature:
BLAST of CF504016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504016 ID=CF504016; Name=CF504016; organism=Citrus sinensis; type=EST; length=323bpback to top |