CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_STRPU (Tubulin beta chain (Fragment) OS=Strongylocentrotus purpuratus PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.305e-31 Identity = 63/133 (47.37%), Postives = 89/133 (66.92%), Query Frame = 3 Query: 174 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 12 FSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 144
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_SCHPO (Tubulin beta chain OS=Schizosaccharomyces pombe GN=nda3 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.227e-31 Identity = 67/189 (35.45%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+ D LD +R+ A+ C LQGF + +++ +Y + F+V P+P+ S +VVEPYN+ LS H L+E++D +DNEA+ I +L I+ P+Y +LN LVS V++ +T S RF G LN D+ + N+VP+PR+HF + +AP+ + + + +SV E+T F+ ++M Sbjct: 111 ELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBBP_DROME (Probable tubulin beta chain CG32396 OS=Drosophila melanogaster GN=CG32396 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.275e-26 Identity = 55/188 (29.26%), Postives = 104/188 (55.32%), Query Frame = 3 Query: 9 IVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 I+D L+ R+ ++ LQGF + +++ Y + PSP +S VVEPYN++LST +L+ ++ + LDNEA++ IC R+L ++ Y ++N +V+ +S +T LRF G LN + + N+VP+PR+HF++ +AP+++ ++ + +V+E+ F +++ Sbjct: 111 ILDQVLENTRREVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVNNSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNL 298
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-20 Identity = 52/166 (31.33%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS 500 + I + ++ I + A+ L+GF+V +++ + KK ++V+P+ Q VV+PYNS+L+ L+ H D V+LDN A+ I L ++ P++ N+LVS VI++ T +LR+ G +N D+ +L+P PR HF+++SY P S Sbjct: 112 ERIYEDIMEMIDREAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDLVGIIASLIPTPRCHFLMTSYTPFTS 277
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 55/166 (33.13%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 494 ++ VD +D + + AD L+GF++ +++ Y KK ++V+P+ QV TS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 64 EQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN-QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 228
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 494 +++VD +D I + AD L+GF++ +++ Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 112 EQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBG2_MOUSE (Tubulin gamma-2 chain OS=Mus musculus GN=Tubg2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 53/184 (28.80%), Postives = 102/184 (55.43%), Query Frame = 3 Query: 27 DRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AFHEQLSVAEITNSAFEPSSM 572 D I + AD L+GF++ +++ Y KK ++V+P+ ++S VV+PYNS+L+ L ++ D V+LDN A+ I L I+ P+++ +N+LVS ++S+ T +LR+ G +N D+ +L+P PR+HF+++ Y P+ + + A + +V ++ +P ++ Sbjct: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNV 303
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 52/165 (31.52%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 494 +++VD +D + + AD L+GF++ +++ Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 112 EQVVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBG2_BOVIN (Tubulin gamma-2 chain OS=Bos taurus GN=TUBG2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 53/184 (28.80%), Postives = 102/184 (55.43%), Query Frame = 3 Query: 27 DRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AFHEQLSVAEITNSAFEPSSM 572 D I + AD L+GF++ +++ Y KK ++V+P+ ++S VV+PYNS+L+ L ++ D V+LDN A+ I L I+ P+++ +N+LVS ++S+ T +LR+ G +N D+ +L+P PR+HF+++ Y P+ + + A + +V ++ +P ++ Sbjct: 120 DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNV 303
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 55/166 (33.13%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 494 ++ VD +D + + AD L+GF++ +++ Y KK ++V+P+ QV TS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ Sbjct: 112 EQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN-QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |