CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 1.805e-65 Identity = 119/189 (62.96%), Postives = 152/189 (80.42%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE++D LD++R++AD+C+GLQGFLVF++ VDYGKKSKL F VYP+PQ +TSVVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERP+Y NLNRL++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L +Y+PVISA+KA HE SV +IT S FEP++ Sbjct: 112 KEMIDQVLDKVRRMADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPSYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYSPVISADKASHEANSVQDITMSCFEPNN 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.170e-64 Identity = 117/189 (61.90%), Postives = 152/189 (80.42%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE++D+ LDRIRK +NC GLQGFLVF++ V++GKKSKL F+VYP+PQVSTSVVEPYNS+L+TH+ LE +D + ++DNEAIYD+CR+ L +ERP+Y+NLNRL++QV+SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L++YAPVISA++A HE LSV +IT+ FE ++ Sbjct: 115 KELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKAN 303
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 1.995e-64 Identity = 118/187 (63.10%), Postives = 147/187 (78.61%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEP 563 KE+VD D+IR++ADNC+GLQGFLVF++ ++Y KKSKL F+VYP+PQVSTSVVEPYNSVL+TH+ L+ D ++DNE+ YDICRR+LDIERP+Y NLNRL++QV+SS+TASLRF+G+LNVD+ EFQTNLVPYPRIHF L +YAP++SA KAFHE SV EITN FEP Sbjct: 112 KELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDNESCYDICRRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEP 298
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 2.881e-63 Identity = 117/189 (61.90%), Postives = 145/189 (76.72%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 +EI+ LDRIRKLAD C GLQGFL +++ +YGKKSKL F VYP+PQVSTSVVEPYN+VL+TH+ LEH D ++DNEAIYD+C+R+LDI RP++ NLN L++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SY+PV+S KAFHE SV+EITN+ FEP + Sbjct: 113 REILGDVLDRIRKLADQCDGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDMCKRNLDIPRPSFANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYSPVLSKSKAFHESNSVSEITNACFEPGN 301
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 8.383e-63 Identity = 116/189 (61.38%), Postives = 147/189 (77.78%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE++D LD++R++ADNC+GLQGFLVF++ VDYGKKSKL F VYP+PQ +TSVVEPY++ L+T++ LE D + ++DNEAIYDICRR+L +ERP Y NLNRL++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L +YAPVISA KA HE SV E+T S FEP++ Sbjct: 112 KELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNTTLEQADCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNN 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.095e-62 Identity = 113/189 (59.79%), Postives = 145/189 (76.72%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 +E++D LDRIRK++D C GLQGFL +++ +DYGKKSKL F VYP+PQVSTSVVEPYN+VL+TH+ LEH D ++DNEAIY++C+++LDI RP++ NLN L++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAP++S KA HE SV EITN+ FEP + Sbjct: 114 RELLDDILDRIRKISDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSIDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYEMCKKNLDISRPSFANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPILSKSKAHHESNSVGEITNACFEPGN 302
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA3_CHICK (Tubulin alpha-3 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 5.434e-62 Identity = 115/175 (65.71%), Postives = 141/175 (80.57%), Query Frame = 3 Query: 45 ADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 AD C+GLQGFLVF++ V+Y KKSKL F+VYP QVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDIC R+LDIERPTYTNLNRL+ Q++SS+TASLRF+GALNVD+ EFQTNLVPYPRIHF L++YA +ISAEKA+HEQLSV EITN+ FE S+ Sbjct: 1 ADQCSGLQGFLVFHSFGGGTGSGFTSLLMERLSVEYSKKSKLEFSVYPDRQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICNRNLDIERPTYTNLNRLIGQIVSSVTASLRFNGALNVDLIEFQTNLVPYPRIHFPLTTYARIISAEKAYHEQLSVPEITNACFEFSN 175
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 9.268e-62 Identity = 114/189 (60.32%), Postives = 144/189 (76.19%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 +EI+D LDR+R+++D C GLQGFL +++ +DYGKKSKL F VYP+PQVSTSVVEPYN+VL+TH+ LEH D ++DNEAIYD+CRR+LDI RP +++LN L++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAPV S +A HE SV+EIT S FEP + Sbjct: 113 REILDDILDRVRRMSDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSLDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDMCRRNLDIARPNFSSLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPVFSKSRATHEANSVSEITQSCFEPGN 301
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 2.697e-61 Identity = 114/189 (60.32%), Postives = 145/189 (76.72%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 +EIVD +RIRK+AD C GLQGFL +++ +YGKKSKL F VYP+PQ+STSVVEPYN+VL+TH+ LEH D ++DNEAIYDIC+R+L I RP+++NLN L++QVISS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L SYAP++S ++A HE SV+EITN+ FEP + Sbjct: 113 REIVDEVEERIRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYPAPQLSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDICKRNLGISRPSFSNLNGLIAQVISSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPILSKKRATHESNSVSEITNACFEPGN 301
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 234.572 bits (597), Expect = 2.697e-61 Identity = 112/189 (59.26%), Postives = 144/189 (76.19%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE+ + LDRIRK+ DNC LQGFLVF++ DY KK KL F+VYP+P+V+T+VVEPYN+VL+THS LEH+DV L+DNEA+YDICRR+LDI RP+Y +LNRL++QV+SS+T+SLRFDGALNVD+ EFQTNLVP+PR+H+ L SYAPVISA K+ HE +E+T FEP++ Sbjct: 113 KEMAENVLDRIRKITDNCHSLQGFLVFHSFGGGTGSGFGALVLERLAQDYAKKCKLEFSVYPAPRVATAVVEPYNAVLATHSTLEHSDVTFLVDNEAVYDICRRNLDIPRPSYEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRVHYPLISYAPVISATKSAHESFKTSELTLQCFEPNN 301 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |