CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_UNCNE (Tubulin beta chain OS=Uncinula necator PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.946e-35 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+Y+IC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +M Sbjct: 111 ELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYEICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB8_HUMAN (Tubulin beta-8 chain OS=Homo sapiens GN=TUBB8 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 1.946e-35 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+++ +D +RK A++C LQGF + +++ +Y + F++ PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC ++L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +M Sbjct: 111 ELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB3_ECHMU (Tubulin beta-3 chain OS=Echinococcus multilocularis GN=TUB-3 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.946e-35 Identity = 72/189 (38.10%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+++ LD +RK + C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E TD +DNEA+YDIC R+L + P Y++LN LVS +S +T SLRF G LN D+ + N+VP+PR+HF + +AP+ S ++ ++ E+T F+ +M Sbjct: 111 ELIEEVLDVVRKECEACDCLQGFQLCHSLGGGTGSGMGTLLIAKIREEYPDRIMTSFSVVPSPKVSDTVVEPYNATLSVHQLVESTDETFCIDNEALYDICFRTLKLPNPNYSDLNHLVSLTMSGVTTSLRFPGQLNSDLRKLAVNMVPFPRLHFFVPGFAPLASRTSQSYQSCTILELTRQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.946e-35 Identity = 76/189 (40.21%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PS +VS VVEPYN+ LS H L+E++D +DNEA+YDICRR+L P+Y +LN LVS+V+S LT RF G LN D+ + NLVP+PR+HF +AP+ S+ A L +AE+T F+P ++ Sbjct: 111 ELVDQVLDVVRREAEACDSLQGFQITHSLGGGTGSGMGTLLIAKVREEFPDRMMATFSVLPSAKVSEVVVEPYNATLSIHQLVENSDETFCIDNEALYDICRRTLKQAHPSYGHLNHLVSRVMSGLTTGFRFPGQLNADLRKLAVNLVPFPRLHFFTVGFAPLTSS--ASFSNLGIAELTQQMFDPKNV 297
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.542e-35 Identity = 72/189 (38.10%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+ + +D +RK A++C LQGF + +++ +Y + F++ PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC ++L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +M Sbjct: 39 ELTESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMVTLLISKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNM 227
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.542e-35 Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF V +++ ++ + ++V PSP+VS +VVEPYN LS H L+E+ D +DNEA+Y+IC +L P Y +LN+LVS V+S +T+SLRF G LN D+ + NLVP+PR+HF + YAP+ + + +VA++T F+P +M Sbjct: 111 ELVDSVLDVVRREAEGCDCLQGFQVTHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLNKLVSGVMSGITSSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGYAPLSADGVTAYRAKTVADLTKQMFDPKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.542e-35 Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF V +++ ++ + ++V PSP+VS +VVEPYN LS H L+E+ D +DNEA+Y+IC +L P Y +LN+LVS V+S +T+SLRF G LN D+ + NLVP+PR+HF + YAP+ + + +VA++T F+P +M Sbjct: 111 ELVDSVLDVVRREAEGCDCLQGFQVTHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLNKLVSGVMSGITSSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGYAPLSADGVTAYRAKTVADLTKQMFDPKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.542e-35 Identity = 76/191 (39.79%), Postives = 118/191 (61.78%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV-TEFQTNLVPYPRIHFMLSSYAPVIS-AEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD RK A++C LQGF + +++ +Y + + F+V PSP+VS +VVEPYN+ LS H L+E++D ++ +DNEA+YDIC R+L + PT+ +LN LV+ V+S +T LRF G LN D+ NLVP+PR+HF + +AP+ S + + + LSVA++T F+ +M Sbjct: 111 ELIDSVLDVCRKEAESCDCLQGFQLSHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSVIPSPRVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVAAVMSGVTCCLRFPGQLNSDLRNRLAVNLVPFPRLHFFMMGFAPLTSRGSQEYRQGLSVADVTQQMFDAKNM 301
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_THAWE (Tubulin beta chain OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.319e-35 Identity = 72/189 (38.10%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A++C +QGF + +++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+ D LDNEA+YDIC R+L + PTY +LN L++ + T LRF G LN D+ + N+VP+PR+HF + YAP+ S + L+V E+T F+ +M Sbjct: 111 ELIDSVLDVVRKEAESCDCMQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLIAAAVCGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGYAPLTSRGSQQYRALTVPELTQQCFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_PHYCI (Tubulin beta chain OS=Phytophthora cinnamomi PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.319e-35 Identity = 74/189 (39.15%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A++C LQGF + +++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+ D + LDNEA+YDIC R+L + PTY +LN LV +S +T LRF G LN + F NL+P+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 ELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTNPTYGDLNHLVCAAMSGITTCLRFPGQLNSVLKLFAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNM 299 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |