CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 3.319e-35 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+Y+IC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +M Sbjct: 111 ELVDQVLDVVRREAEACDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYEICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMYDPKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_DICDI (Tubulin beta chain OS=Dictyostelium discoideum GN=tubB PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 4.335e-35 Identity = 70/189 (37.04%), Postives = 114/189 (60.32%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+V+ LD +R+ + C LQGF V +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E+ D + +DNEA++DIC R+L + +P Y +LN L+S V+S +T LRF G LN D+ + NL+P+PR+HF L +AP+ + + + +++V E+T F+ +M Sbjct: 116 ELVESVLDVVRRETEGCDCLQGFQVTHSIGGGTGSGLGTLLISKIREEFPDRMMCTFSVVPSPKVSLTVVEPYNATLSVHQLVENADEVMCIDNEALHDICFRTLKLTQPNYGDLNHLISSVMSGITCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTAKGASSYNRITVPELTQQMFDAKNM 304
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_ENTDO (Tubulin beta chain OS=Enteroctopus dofleini PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.662e-35 Identity = 74/189 (39.15%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD IRK + C +QGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDI R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + SV+++T F+ +M Sbjct: 111 ELVDTVLDVIRKECEGCECIQGFQMTHSLGGGTGAGMGTLLISKYREEYPDRIMTTFSVMPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYDISLRTLKLPNPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQDYRMHSVSDLTQQLFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBBN_GUITH (Tubulin beta chain, nucleomorph OS=Guillardia theta GN=tubB PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 7.395e-35 Identity = 72/189 (38.10%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+++ +D IRK ++ C LQGF + +++ +Y + ++V PSP+VS +VVEPYN LS H L+E+ D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T SLRF G LN D+ + NLVP+PR+HF + +AP+ S + ++V ++T F+ +M Sbjct: 111 ELIESAMDIIRKESEQCECLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNCTLSIHQLVENADEVFCIDNEALYDICFRTLKLVTPSYGDLNHLVSAVMSGITCSLRFPGQLNADLRKLAVNLVPFPRLHFFMVGFAPLGSRGSQQYRSMTVNDLTQQMFDSKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB8_PANTR (Tubulin beta-8 chain OS=Pan troglodytes GN=TUBB8 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.395e-35 Identity = 71/189 (37.57%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+++ +D +RK A++C LQGF + +++ +Y + F++ PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC ++L + PTY +LN LV +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+VAE+T F+ +M Sbjct: 111 ELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVCATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.395e-35 Identity = 73/189 (38.62%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK A+ LQGF + +++ +Y + ++V PSP VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + PTY +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF ++ +AP+ + + ++V E+T F+ +M Sbjct: 111 ELVDSVLDVVRKEAEGTDCLQGFQITHSLGGGTGAGMGTLLMSKIREEYPDRMMCTYSVVPSPAVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSFVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMTGFAPLTARGSQQYRAVTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.395e-35 Identity = 70/189 (37.04%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF + +++ +Y + L F+V+ P+ S +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L++ E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFAVPEGSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_ENCCU (Tubulin beta chain OS=Encephalitozoon cuniculi GN=TUB2 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.261e-34 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D +D +RK A++ LQGF + +++ D+ + F+V PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC R+L + P Y +LN LVS V+S +T LRF G LN D+ + N++P+PR+HF ++ +AP+I+ + SV+E+T F+ +M Sbjct: 111 ELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIHQLVENADETFCIDNEALYDICFRTLKLNNPGYGDLNHLVSLVMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFVAGFAPLIAIGTQKFKTYSVSELTQQMFDSKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.647e-34 Identity = 72/189 (38.10%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D L +RK A+NC LQGF V +++ +Y + + F+V+ SP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDI R+L + PT+ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLAVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFASPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIXLRTLKLVTPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYXSLTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.152e-34 Identity = 72/190 (37.89%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFT-VYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD +D +R+ A+ C LQGF + +++ ++ + F+ V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T ++P +M Sbjct: 111 ELVDQVIDVVRREAERCDCLQGFQIIHSLGGGTGAGMGTLLISKIREEFPDRMMATFSSVVPSPKVSDTVVEPYNATLSNHQLVENSDETFCIDNEALYDICMRTLKLSEPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAYSFRVVTVPELTQKMYDPKNM 300 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |