CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 9.547e-75 Identity = 134/189 (70.90%), Postives = 160/189 (84.66%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KEIVD+ LDRIRKLAD CTGLQGFLVF++ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTY NLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVIS EKA+HEQL+VAEITN+ FEP++ Sbjct: 112 KEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPAN 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA1_CHICK (Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 9.547e-75 Identity = 135/189 (71.43%), Postives = 160/189 (84.66%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KEI+DL LDRIRKLAD CTGLQGF VF++ VDYGKKSKL F++YP+ QVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKA+HEQLSVAEITN+ FEP++ Sbjct: 73 KEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPARQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 261
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_HAECO (Tubulin alpha chain OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 1.628e-74 Identity = 133/187 (71.12%), Postives = 160/187 (85.56%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEP 563 KEI+DL LDRIR+LADNCTGLQGFLVF++ VDYGKK+KL F+VYP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERP+YTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++++PVISAEKA+HEQLSVAEITN FEP Sbjct: 112 KEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEP 298
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 3.628e-74 Identity = 133/189 (70.37%), Postives = 159/189 (84.13%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE +DL LDRIRKL D C+GLQGFL+F++ +DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP+ISAEKA+HEQLSVAEIT+S FEP+S Sbjct: 112 KESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA8_HUMAN (Tubulin alpha-8 chain OS=Homo sapiens GN=TUBA8 PE=1 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 3.628e-74 Identity = 133/189 (70.37%), Postives = 159/189 (84.13%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE +DL LDRIRKL D C+GLQGFL+F++ +DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP+ISAEKA+HEQLSVAEIT+S FEP+S Sbjct: 112 KESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA8_BOVIN (Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 3.628e-74 Identity = 133/189 (70.37%), Postives = 159/189 (84.13%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE +DL LDRIRKL D C+GLQGFL+F++ +DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP+ISAEKA+HEQLSVAEIT+S FEP+S Sbjct: 112 KESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 4.738e-74 Identity = 132/189 (69.84%), Postives = 159/189 (84.13%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE +DL LDRIRKL D C+GLQGFL+F++ +DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP++SAEKA+HEQLSVAEIT+S FEP+S Sbjct: 112 KESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIVSAEKAYHEQLSVAEITSSCFEPNS 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_ENTDO (Tubulin alpha chain OS=Enteroctopus dofleini PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 5.238e-73 Identity = 128/189 (67.72%), Postives = 161/189 (85.19%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE +DL LDR+RKL+D CTGLQGFL+F++ VDYGKKSKL F++YP+PQV+T+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDIC+R+LDIERP+YTNLNRL+SQV+SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP+ISAEKA+HEQL+VAE+T++ FEP++ Sbjct: 112 KEHIDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDIERPSYTNLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLAVAEVTSACFEPAN 300
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA2_CAEEL (Tubulin alpha-2 chain OS=Caenorhabditis elegans GN=tba-2 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.991e-72 Identity = 127/189 (67.20%), Postives = 159/189 (84.13%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE++D LDRIR+LADNC+GLQGF VF++ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD+ERP+YTNLNR++SQV+SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L++Y P+ISAEKA+HE LSV++ITNS FEP++ Sbjct: 110 KELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPAN 298
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA1_PNECA (Tubulin alpha chain OS=Pneumocystis carinii GN=TUB1 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 5.421e-70 Identity = 128/189 (67.72%), Postives = 155/189 (82.01%), Query Frame = 3 Query: 3 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 KE++D LDRIR++ADNCTGLQGFLVF++ VDYGKKSKL F+VYP+PQVSTSVVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERP Y NLNRL++QV+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L +YAP+ISA KA HE SVAEITN+ FEP++ Sbjct: 112 KELIDHVLDRIRRVADNCTGLQGFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPGYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVTYAPLISAAKAHHEANSVAEITNACFEPNN 300 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |