CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB8_ARATH (Tubulin beta-8 chain OS=Arabidopsis thaliana GN=TUBB8 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB7_ARATH (Tubulin beta-7 chain OS=Arabidopsis thaliana GN=TUBB7 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 74/189 (39.15%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + + F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB6_ORYSJ (Tubulin beta-6 chain OS=Oryza sativa subsp. japonica GN=TUBB6 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB5_MAIZE (Tubulin beta-5 chain OS=Zea mays GN=TUBB5 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB4_ORYSJ (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica GN=TUBB4 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB4_ELEIN (Tubulin beta-4 chain OS=Eleusine indica GN=TUBB4 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB3_PEA (Tubulin beta-3 chain (Fragment) OS=Pisum sativum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 102 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNM 290
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_WHEAT (Tubulin beta-2 chain OS=Triticum aestivum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_LUPAL (Tubulin beta-2 chain OS=Lupinus albus GN=TUBB2 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 75/189 (39.68%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +M Sbjct: 111 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNM 299 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |