CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_GEOCN (Tubulin beta-1 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 74/189 (39.15%), Postives = 115/189 (60.85%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+N LQGF + +++ +Y + F+V PSP+VS ++VEPYN+ LS H L+E+ D +DNEA+YDIC+ +L +++PT+ +LN+LVS V+S +T LRF G LN D+ + NLVP+PR+HF + YAP+ + + L+V E+T F+ +M Sbjct: 111 ELVDSVLDIVRREAENSDSLQGFQISHSLGGGTGSGMGTLLISKIREEYPDRMMATFSVVPSPKVSDTIVEPYNATLSVHQLIENADETFCIDNEALYDICQHTLKLKQPTHADLNQLVSGVMSGITTCLRFPGQLNSDLRKLAVNLVPFPRLHFFMVGYAPLSAPGQQSFRSLTVPELTQQLFDSKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_CYAPA (Tubulin beta-1 chain OS=Cyanophora paradoxa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 74/189 (39.15%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+ C LQGF + +++ +Y + ++V+PSP+VS +VVEPYN+ LS H L+E+ D +++DNEA+YDIC R+L + PTY +LN LVS IS +T LRF G LN D+ + NL+P+PR+HF + + P+ S + L+V E+T F+ +M Sbjct: 111 ELIDSVLDVVRKEAEGCDCLQGFQITHSMGGGTGSGMGTLLIAKVREEYPDRMMCTYSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFVPLTSRGSQQYRALTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBA_OCTVU (Tubulin alpha chain (Fragment) OS=Octopus vulgaris PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 70/89 (78.65%), Postives = 86/89 (96.63%), Query Frame = 3 Query: 303 ICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 IC+R+LDIERP+YTNLNRL+SQV+SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAP+ISAEKA+HEQL+VAE+T++ FEP++ Sbjct: 1 ICKRNLDIERPSYTNLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLAVAEVTSACFEPAN 89
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBAA_PNECA (Tubulin alpha chain (Fragment) OS=Pneumocystis carinii GN=TUB-A PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.032e-36 Identity = 73/97 (75.26%), Postives = 86/97 (88.66%), Query Frame = 3 Query: 279 LDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSS 569 +DNEAIYDICRR+L IERP YTNLNRL++ V+SS+TASLRFDG+LNVD+ EFQTNLVPYPRIHF L +YAPVISA KA HE SV+EITN+ FEP++ Sbjct: 1 VDNEAIYDICRRNLGIERPGYTNLNRLIAHVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVTYAPVISAAKAVHEANSVSEITNACFEPNN 97
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_USTMA (Tubulin beta chain OS=Ustilago maydis GN=UM05828 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 75/189 (39.68%), Postives = 115/189 (60.85%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD IRK A+NC LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+Y+IC ++L + PTY +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + ++P+ + + +++ EIT AF+ +M Sbjct: 111 ELVDSVLDVIRKEAENCDMLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMATFSVLPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYNICFKTLKLNAPTYGDLNHLVSLVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFSPLTARGSQSYRAVTIPEITQQAFDSKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_TRITR (Tubulin beta chain OS=Trichuris trichiura PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 76/189 (40.21%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK +++C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 ELVDNVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMTTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQGYRALTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB6_MOUSE (Tubulin beta-6 chain OS=Mus musculus GN=Tubb6 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 76/189 (40.21%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK ++C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T SLRF G LN D+ + N+VP+PR+HF + +AP+ + + L+V E+T F+ +M Sbjct: 111 ELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB6_BOVIN (Tubulin beta-6 chain OS=Bos taurus GN=TUBB6 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 76/189 (40.21%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK ++C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T SLRF G LN D+ + N+VP+PR+HF + +AP+ + + L+V E+T F+ +M Sbjct: 111 ELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB5_CHICK (Tubulin beta-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 76/189 (40.21%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK ++C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T SLRF G LN D+ + N+VP+PR+HF + +AP+ + + L+V E+T F+ +M Sbjct: 111 ELVDSVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 75/189 (39.68%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +M Sbjct: 111 ELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNM 299 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |