CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_COLGL (Tubulin beta-2 chain OS=Colletotrichum gloeosporioides GN=TUB2 PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 75/189 (39.68%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +M Sbjct: 111 ELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 75/189 (39.68%), Postives = 114/189 (60.32%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+NC LQGF V +++ +Y + F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T + +M Sbjct: 79 ELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMXTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLVTPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMRDAKNM 267
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 76/189 (40.21%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A++C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+ D + +DNEA+YDI R+L + PTY +LN LVS V+S +T LRF G LN D+ + NL+P+PR+HF L +AP+ S + L+V E+T F+ +M Sbjct: 111 ELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDISFRTLKLTTPTYGDLNHLVSAVMSGITCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTSRGSVGYRSLTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_NOTCO (Tubulin beta-1 chain OS=Notothenia coriiceps neglecta GN=tubb1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.348e-36 Identity = 77/189 (40.74%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK A+ C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 ELVDSVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGGQQYRSLTVPELTQQMFDSKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_TETTH (Tubulin beta chain OS=Tetrahymena thermophila GN=BTU1 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 75/189 (39.68%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A+ C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+ D +++DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 ELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_PIG (Tubulin beta chain OS=Sus scrofa PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 76/189 (40.21%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK +++C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 ELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_MYCGR (Tubulin beta chain OS=Mycosphaerella graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 74/189 (39.15%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +M Sbjct: 111 ELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVENSDATFCIDNEALYDICMRTLKLNNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQIFDPKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_CERBT (Tubulin beta chain OS=Cercospora beticola GN=TUB1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 74/189 (39.15%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +R+ A+ C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S ++V E+T F+P +M Sbjct: 111 ELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVENSDATFCIDNEALYDICMRTLKLNNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQIFDPKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB6_HUMAN (Tubulin beta-6 chain OS=Homo sapiens GN=TUBB6 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 76/189 (40.21%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK ++C LQGF + +++ ++ + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T SLRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 ELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB6_ECTVR (Tubulin beta-6 chain OS=Ectocarpus variabilis GN=TUBB6 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.760e-36 Identity = 76/189 (40.21%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A++C LQGF + +++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+ D LDNEA+YDIC R+L + PTY +LN LVS I T SLRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 ELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNM 299 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |