CF504033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_ACHKL (Tubulin beta chain OS=Achlya klebsiana PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.152e-34 Identity = 74/189 (39.15%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A++C LQGF + +++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+ D + LDNEA+YDIC R+L + PTY +LN LV +S +T LRF G LN V + NL+P+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 110 ELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTNPTYGDLNHLVCAAMSGITTLLRFPGQLN-SVLKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNM 297
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_USTVI (Tubulin beta chain OS=Ustilago violacea PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.810e-34 Identity = 74/189 (39.15%), Postives = 114/189 (60.32%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK A+ LQGF + +++ ++ + F+V PSP+VS +VVEPYN+VLS H L+E++D +DNEA+YDIC R+L + PT+ +LN LVS V+S +T LRF G LN D+ + N+VP+PR+HF +AP+ + + + ++VAE+T F+ +M Sbjct: 111 ELVDQVLDVVRKEAEGTDCLQGFQLTHSLGGGTGSGMGTLLVSKIREEFPDRMMATFSVVPSPKVSDTVVEPYNAVLSVHQLVENSDETFCIDNEALYDICFRTLKLSAPTHGDLNGLVSIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFTVGFAPLTARGSSQYRAVTVAELTAQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_SUIBO (Tubulin beta-2 chain OS=Suillus bovinus GN=TUBB2 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.793e-34 Identity = 69/189 (36.51%), Postives = 118/189 (62.43%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +R+ + LQGF + +++ +Y + F++ P+P VS +VVEPYNS+LS H L+++ D+ + +DNEA+YDI R+L I+ P Y +LN+L+++V+ ++ SLRF G LN D+ + NLVP+PR+HF++ S+AP + ++LSV+E+T+S F+ ++ Sbjct: 115 ELIDGILDIVRRQCEATEALQGFQMIHSLGGGTGAGLGSLLLSKLREEYPDRMLSTFSILPAPNVSETVVEPYNSLLSIHQLVDNCDLTICIDNEALYDIAVRTLKIKSPGYKDLNQLIAKVMCGVSTSLRFPGQLNGDLRKLGMNLVPFPRLHFLMPSFAPFYDPKARTFQRLSVSELTSSLFDKKNL 303
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB2_GEOCN (Tubulin beta-2 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 6.260e-34 Identity = 69/189 (36.51%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D +D IR+ A+ LQGF + +++ +Y + ++V PSP+VS +V EPYN+VLS H L+++ D LDNEA+YDIC ++L I RP++ +LN L++ V+S +T LR+ G LN D+ + NLVP+PR+HF + +AP+ + L+V E+T F P+++ Sbjct: 113 ELMDSVMDIIRREAEQSESLQGFQLAHSLGGGTGSGLGTLLLTKIREEYPDRMLSTYSVLPSPKVSDTVTEPYNAVLSFHQLIDNADATYCLDNEALYDICEKTLKINRPSHQDLNSLIALVMSGVTTGLRYPGQLNGDLRKLAVNLVPFPRLHFFTTGFAPLFAKNSRAFHNLTVPELTQQLFNPANV 301
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.176e-34 Identity = 71/189 (37.57%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E+VD LD +RK A+ LQGF + +++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + PTY +LN L+S V+S +T LRF G LN D+ + N+VP+PR+HF + P+ + + ++V E+T F+ +M Sbjct: 111 ELVDAVLDVVRKEAEGTDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLTTPTYGDLNHLISIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMPGVCPLTARGSQQYRAVTVPELTQQMFDAKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_ENCHE (Tubulin beta chain OS=Encephalitozoon hellem GN=TUB2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.395e-33 Identity = 72/189 (38.10%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D +D +RK A++ LQGF + +++ D+ + F+V PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YDIC R+L + P Y +LN LVS V+S +T LRF G LN D+ + N++P+PR+HF + AP+I+ + SV+E+T F+ +M Sbjct: 111 ELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIHQLVENADETFCIDNEALYDICFRTLKMSNPGYGDLNHLVSLVMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFVVGSAPLIAIGTQKFKTYSVSELTQQMFDSKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.058e-33 Identity = 72/189 (38.10%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D LD +RK A++C LQGF + +++ +Y + + F+V PSP+VS +VVEPYN+ LS H L+E+ D + + NEA+YDIC +L + PT+ + LVS V+S +T LRF G LN D+ + NL+P+PR+HF L +AP+ S + L+V E+T F+ +M Sbjct: 109 ELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVIPSPKVSDTVVEPYNTTLSVHQLVENADEVMCIGNEALYDICLPTLKLTTPTFGH-ETLVSAVMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 296
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32 Identity = 69/189 (36.51%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 E++D +D +RK A++ LQGF + +++ D+ + F+V PSP+VS +VVEPYN+ LS H L+E+ D +DNEA+YD+C R+L + P Y +LN LVS V+S +T LRF G LN + + N++P+PR+HF + +AP+ + + SV+E+T F+ +M Sbjct: 111 ELIDSVMDVVRKEAESSDCLQGFQITHSLGGGTGAGMGTLLLSKIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIHQLVENADETFCIDNEALYDMCFRTLKLNNPGYGDLNHLVSLVMSGVTTCLRFPGQLNAYLRKLAVNMIPFPRLHFFVVGFAPLTAVGTQKFKTYSVSELTQQMFDSKNM 299
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB1_DAUCA (Tubulin beta-1 chain (Fragment) OS=Daucus carota GN=TUBB1 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 5.859e-32 Identity = 63/142 (44.37%), Postives = 96/142 (67.61%), Query Frame = 3 Query: 147 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ DV ++LDNEA+YDIC R+L + P++ +LN L+S +S +T SLRF G LN D+ + L+P+PR+HF + +AP+ S + LSV E+T ++ +M Sbjct: 26 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADVCMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVILIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDSKNM 167
BLAST of CF504033 vs. ExPASy Swiss-Prot
Match: TBB_BOMMO (Tubulin beta chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.653e-32 Identity = 68/189 (35.98%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 6 EIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSM 572 ++++ LD +RK A+ C LQGF + +++ +Y + ++V PSP VS +VVEPYN+ LS + L+E++ + +DNEA+Y IC R+L + PTY LN LVS +S +T LRF G LN D+ + N++P+PR+HF + +AP+ S + L+V E+T F+ +M Sbjct: 111 DLLETVLDVVRKEAEGCDCLQGFQLVHSLGGGTGSGMGTLLLANLTDEYPDRITATYSVVPSPTVSETVVEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMAPTYGALNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNM 299 The following BLAST results are available for this feature:
BLAST of CF504033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504033 ID=CF504033; Name=CF504033; organism=Citrus sinensis; type=EST; length=574bpback to top |