CF504038

Overview
NameCF504038
Unique NameCF504038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length192
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF504038 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.404e-11
Identity = 28/60 (46.67%), Postives = 44/60 (73.33%), Query Frame = 1 
Query:    1 KRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGE 180
            KRL++V V  +EF ++ME+VG + H+N+  L+AYYYS+ +KL V+ Y   G+L  +LHG+
Sbjct:   87 KRLEEVVVGRREFEQQMEIVGRIRHDNVAELKAYYYSKIDKLAVYSYYSQGNLFEMLHGK 146
The following BLAST results are available for this feature:
BLAST of CF504038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
Y5168_ARATH3.404e-1146.67Probably inactive receptor-like protein kinase At5... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-526 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504038 ID=CF504038; Name=CF504038; organism=Citrus sinensis; type=EST; length=192bp
AAGAGGTTGAAGGATGTGACGGTGTCGGAGAAGGAATTTAGGGAGAAGAT
GGAGGTGGTGGGATCTATGGATCATGAGAATTTGGTCCCATTGCGGGCTT
ATTATTACAGCAGAGATGAAAAGCTTCTTGTTCATGATTACATGCCCATG
GGAAGCTTATCTGCACTTTTGCATGGTGAGCACCTTTATATC
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