CF504043

Overview
NameCF504043
Unique NameCF504043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.434e-22
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 3
Query:  276 DVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            D+ L Y LGRE+GRGEFGITYLCT+  TG ++ACKSI K+KL      +DVRREVE+M+++   PN+V  K ++EDD  VHIV
Sbjct:   54 DISLQYDLGREVGRGEFGITYLCTDKETGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPKHPNVVSLKDSFEDDDAVHIV 136          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.485e-22
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 3
Query:  276 DVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            D+ L Y LGRE+GRGEFGITYLCT+  TG ++ACKSI K+KL      +DVRREVE+M+++   PNIV  K A+EDD  VHIV
Sbjct:   52 DISLMYDLGREVGRGEFGITYLCTDIKTGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAVHIV 134          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.857e-22
Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  228 PAARQLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            P  R+  + +L      ++ HY LG++LG+G+FG TYLCTE ST   +ACKSIPKRKLV     +DV RE+++M +LS  PN+V+ K  YED  FVHIV
Sbjct:    5 PNPRRPSNTVLPYQTPRLRDHYLLGKKLGQGQFGTTYLCTEKSTSANYACKSIPKRKLVCREDYEDVWREIQIMHHLSEHPNVVRIKGTYEDSVFVHIV 103          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.305e-21
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 3
Query:  228 PAARQLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            P  R+  +++L      ++ HY LG++LG+G+FG TYLCTE S+   +ACKSIPKRKLV     +DV RE+++M +LS  PN+V+ K  YED  FVHIV
Sbjct:    4 PNPRRPSNSVLPYETPRLRDHYLLGKKLGQGQFGTTYLCTEKSSSANYACKSIPKRKLVCREDYEDVWREIQIMHHLSEHPNVVRIKGTYEDSVFVHIV 102          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 3
Query:  276 DVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            ++K  Y LGRELGRGEFG+TYLCTE  TG  FACKSI K+KL      +DV+REVE+M+ +   PNIV  K  YEDD+ VH+V
Sbjct:   49 EIKQKYKLGRELGRGEFGVTYLCTEIETGEIFACKSILKKKLKTSIDIEDVKREVEIMRQMPEHPNIVTLKETYEDDKAVHLV 131          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 2.907e-21
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 3
Query:  237 RQLHDAILCKAYEDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            +Q    IL K   D+   Y LG ELGRG FG+T  C E STG  FACK+I K KL ++  ++DV+RE+ +M+ LSG+PNIV+FK AYED   VHIV
Sbjct:   10 QQSKRTILEKPLVDITKIYILGEELGRGNFGLTRKCVEKSTGKTFACKTILKTKLKDEECEEDVKREIRIMKQLSGEPNIVEFKNAYEDKDSVHIV 105          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.907e-21
Identity = 45/78 (57.69%), Postives = 62/78 (79.49%), Query Frame = 3
Query:  291 YTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            YTL R+LG+G+FG TYLCT+ +TG+++ACKSI KRKL++    +DVRRE+++M +L+G  NIV  K AYED  +VHIV
Sbjct:   85 YTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIV 162          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.458e-21
Identity = 57/124 (45.97%), Postives = 75/124 (60.48%), Query Frame = 3
Query:  162 KGQDSDHPAARQ--LHDKGQDGDYPAARQLHDAILCKAY-EDVKLHYTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            KG+   +P +    LH  G DG     R L   +L      +++  YTLGRELGRGEFG+TYLCT+  T   FACKSI K+KL      +DVRREVE+M+++   PN+V  K  YED+  VH+V
Sbjct:   20 KGRKKQNPFSIDYGLHHGGGDG---GGRPLKLIVLNDPTGREIESKYTLGRELGRGEFGVTYLCTDKETDDVFACKSILKKKLRTAVDIEDVRREVEIMRHMPEHPNVVTLKETYEDEHAVHLV 140          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20
Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 3
Query:  291 YTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            Y+LG +LG+G+FG TY+C E STG E+ACKSI KRKL++    +DVRRE+++M +L+G  NIV  K AYED  +VHIV
Sbjct:   24 YSLGHKLGQGQFGTTYMCKEISTGREYACKSITKRKLISKEDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYVHIV 101          
BLAST of CF504043 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.443e-20
Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 3
Query:  291 YTLGRELGRGEFGITYLCTENSTGLEFACKSIPKRKLVNDYYKDDVRREVEVMQYLSGQPNIVQFKAAYEDDQFVHIV 524
            YTL R+LG+G+FG TYLCTE ++G+++ACKSI KRKL++    +DVRRE+++M +L+G  +IV  K AYED  +VHIV
Sbjct:   97 YTLSRKLGQGQFGTTYLCTEIASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIV 174          
The following BLAST results are available for this feature:
BLAST of CF504043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CDPK7_ARATH3.434e-2257.83Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPK8_ARATH4.485e-2260.24Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPKB_ARATH5.857e-2250.51Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPK4_ARATH1.305e-2149.49Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPKE_ARATH2.226e-2159.04Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPKR_ARATH2.907e-2153.13Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPK6_ARATH2.907e-2157.69Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]
CDPKW_ARATH8.458e-2145.97Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKQ_ARATH1.443e-2057.69Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPK5_ARATH1.443e-2056.41Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-531 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504043 ID=CF504043; Name=CF504043; organism=Citrus sinensis; type=EST; length=524bp
ATTTTAAAGAATCAATTCAAAGGCAGGAACTGTGATGTGTAGTTGAATAC
ATCTGGGTCCTGCATATTCTTTGAAATTGCCCACCTGCAAAAGTCAAATC
CTGAGGTCCTGTCTCGCATCCTCTGTGCCGGTGGCGGCCAGAAATGGGTT
GCATTTTCAGCAAAGGCCAAGACTCAGACCACCCAGCAGCACGCCAACTC
CATGACAAAGGCCAAGATGGAGACTACCCAGCAGCACGCCAACTCCATGA
TGCAATTCTTTGTAAAGCTTATGAGGATGTTAAGTTACATTATACTCTTG
GTAGAGAATTGGGTAGGGGTGAATTTGGTATAACCTATCTTTGTACTGAG
AATTCAACCGGTTTGGAATTTGCTTGCAAGTCTATTCCTAAAAGAAAGCT
GGTAAATGATTATTATAAGGATGATGTAAGAAGAGAGGTTGAGGTAATGC
AATATTTGAGTGGGCAGCCCAACATAGTCCAATTCAAGGCTGCTTATGAG
GATGACCAATTTGTGCATATTGTT
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