CF504052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: BIOB_BACTN (Biotin synthase OS=Bacteroides thetaiotaomicron GN=bioB PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.523e-12 Identity = 53/192 (27.60%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 13 STDVHPLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKF--DLPAPFVLHTDCPHYWRYAHPG------ETEEEYSTRLATI 558 +TD P+ +++++G+ + +G+ ++ ++ WC G + P L AA QL+ + + F T P+++L K LL + S M K+F+ +SGS A + +K+ Y A G+P+K F+ + YHG T A S+ + +H F LP + + + +P ET E++S LA + Sbjct: 336 TTDPLPVYKVKRADGATITLEDGRTLIEGMSSWWCAVHGYNHPVLNQAAKDQLDKMS-HVMFGGLTHDPAIELGKLLLPLVPPS-MQKIFYADSGSVAVEVALKMAVQYWYAAGKPDKNNFVTIRSGYHGDTWNAMSVCDPVTGMHSLFGSSLPVRYFVPAPSSRFDGEWNPDEIIPLRETIEKHSKELAAL 525
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_SYNPX (Acetylornithine aminotransferase OS=Synechococcus sp. (strain WH8102) GN=argD PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.523e-12 Identity = 44/143 (30.77%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 456 PL + + G +V+D G+++LD++AG+ LG S+ L + QL L + + + +L A L++ A VFF NSG+EAN+ +KL + + ++ + + S+HG TL A S +G P HQ F+ Sbjct: 35 PLTLVRGRGCWVWDDQGRRHLDAVAGIATDTLGHSDRALRRSLGRQLRRLQHVSNLYRIPEQDAL--ATWLVQHSCADS---VFFCNSGAEANEAAIKLARKHGHLKRGIDRPRILTASASFHGRTLAAVSATGQPRYHQGFE 172
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_BACST (Acetylornithine aminotransferase OS=Bacillus stearothermophilus GN=argD PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.523e-12 Identity = 44/151 (29.14%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 31 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK-VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 480 + ++ +EG+ V DVNGK+YLD ++G+ LG P + + QLN +W+ + ++ + +E+ + A VFF NSG+EAN+ +KL A + K I ++S+HG T + +G +H F P +H Sbjct: 13 IAVQSAEGTVVTDVNGKQYLDFVSGIAVCNLGHRHPHVQKSIEQQLN------QYWHVSNLFTIPIQEEVASLLVAHSAGDYVFFCNSGAEANEAALKL------ARKHTGRHKVITFRQSFHGRTFATMAATGQEKVHSGFGPLLPEFIH 151
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: TPA_BILWA (Taurine--pyruvate aminotransferase OS=Bilophila wadsworthia GN=tpa PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.913e-12 Identity = 44/165 (26.67%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 10 QSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAG-LWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP-FVLHTDCPHY 498 Q + P + K EG + D++GK YLD+++G +W +G +V A Q+ + ++ + P++ +++L+ M++V+ +NSGSEAN+ K+V K + R + YHG+T+ S G ++ AP F DC Y Sbjct: 22 QHKNFEPAIYVKGEGMRITDIDGKTYLDAVSGGVWTVNVGYGRKEIVDAVAKQMMEMCYFANGIGNV--PTIKFSEKLISKMPG--MSRVYLSNSGSEANEKAFKIVRQIGQLKHGGKKTGILYRARDYHGTTIGTLSACGQFERKVQYGPFAPGFYEFPDCDVY 182 HSP 2 Score: 25.409 bits (54), Expect = 4.913e-12 Identity = 10/25 (40.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 543 QISHNLEDLILKEGPETIAAFIAEP 617 +++ LE++IL GP+ + A I EP Sbjct: 195 KMAKQLEEVILTVGPDELGAVIVEP 219
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_METTH (Acetylornithine aminotransferase OS=Methanobacterium thermoautotrophicum GN=argD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.009e-12 Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPAPF 471 P+V+ +G+ V+D+ G Y+D AG+ ++G + P++ A Q L HS T+ ++LAK L + S +VFF NSG+EAN+ +KL + K + IA + S+HG TL + +G + F LP F Sbjct: 22 PIVLSHGKGATVWDIEGNSYIDCFAGVAVNSIGHAHPKVALAICHQAQRL--IHSSNIYYTREQVELAKLLTAI---SPHDRVFFANSGAEANEGAIKLARKFT------GKSEIIAAENSFHGRTLATVTATGQKKYSEPFRPLPEGF 159
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: BIOA_HAEIN (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Haemophilus influenzae GN=bioA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12 Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 13 STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKF--DLPAPFVL 477 S+D+ +E+++G + +G++ +D ++ W G + PRL AAA QL + + F T P+++LA +LL + + K+FF +SGS A + +K+ Y +A G ++KF + YHG T A S+ +H F LP + L Sbjct: 23 SSDMPLYAVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAAQNQLAKMS-HIMFGGFTHDPAVELA-QLLVQILPNGLDKIFFADSGSVAVEVAMKMAIQYQHAKGEVQRQKFATIRSGYHGDTWNAMSVCDPTTGMHHLFHHSLPVQYFL 178
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_PROMM (Acetylornithine aminotransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=argD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12 Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD 456 P+ + + +G +V+D +G +YLD++AG+ ALG S+ L + QL L + + + +L A L+E A VFF NSG+EAN+ +KL + + ++ + S+HG TL A S +G P H+ F+ Sbjct: 33 PVTLLRGKGCWVWDDHGHQYLDAVAGIATCALGHSDRALRRSLGQQLKQLQHVSNLYRIPEQEAL--AHWLVENSCADS---VFFCNSGAEANEAAIKLARKHGHRRRGIDRPIILTANSSFHGRTLAAISATGQPNFHKGFE 170
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_SHEON (Acetylornithine aminotransferase OS=Shewanella oneidensis GN=argD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.025e-11 Identity = 47/146 (32.19%), Postives = 69/146 (47.26%), Query Frame = 1 Query: 43 KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 480 + EGS V+D G +++D G+ LG P LV A Q L +H T +P+L+LA +L+ A + V+F NSG+EAN+ +KL Y K + IA K++HG T S+ G A F + H Sbjct: 29 RGEGSRVWDQEGNEFIDFAGGIAVNCLGHCHPALVNALKTQGEKL--WHLSNVMTNEPALELATKLVNSTFAER---VYFANSGAEANEAALKLARRYALEKHGVEKDEIIAFDKAFHGRTFFTVSVGGQAAYSDGFGPKPQSITH 169
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_LISIN (Acetylornithine aminotransferase OS=Listeria innocua GN=argD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.025e-11 Identity = 47/147 (31.97%), Postives = 67/147 (45.58%), Query Frame = 1 Query: 28 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP 468 P+ I K G+ V D GK YLD +G+ LG + A +QL + W+ + L + E+ T VFF NSG+EAN+ +KL Y K+K I +KS+HG T + S +G +HQ F P Sbjct: 12 PVDIVKGNGTVVKDATGKTYLDFTSGIAVCNLGHCPENVTEAIQSQLANI------WHTSNLYECALQDSVAELITDGTDKLVFFCNSGTEANEAALKLARKYT------GKEKIITFEKSFHGRTFGSMSATGQAKIHQGFGRLVP 146
BLAST of CF504052 vs. ExPASy Swiss-Prot
Match: ARGD_PASMU (Acetylornithine aminotransferase OS=Pasteurella multocida GN=argD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11 Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 43 KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSG 429 + +GS+V+D GK Y+D +G+ +LG +V Q L +HS T++P+L LA +L+E A +V F NSG+EAN+ +KL Y K K IA ++S+HG TL S+ G Sbjct: 26 RGKGSHVWDQQGKDYIDFTSGIAVNSLGHCADEIVDVLKQQSEKL--WHSSNWFTSEPTLALATKLVEKTFAE---RVMFVNSGAEANEAALKLARRYAVDHFGYQKSKIIAFKQSFHGRTLFTVSVGG 149 The following BLAST results are available for this feature:
BLAST of CF504052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504052 ID=CF504052; Name=CF504052; organism=Citrus sinensis; type=EST; length=619bpback to top |