CF504059

Overview
NameCF504059
Unique NameCF504059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KPCD_RAT (Protein kinase C delta type OS=Rattus norvegicus GN=Prkcd PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 9.918e-22
Identity = 49/122 (40.16%), Postives = 78/122 (63.93%), Query Frame = 2
Query:   47 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRTALT-DLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLLTD-VLRPPFIP 406
            R+++F GT +Y++PE+++G  + F+VDWW+ G+L YEML G +PF G +  E F ++ + TP +    T  + D++++L E+DP KRLG       I+ H FFK + W+LL    + PPF P
Sbjct:  502 RASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDIMEKLFERDPAKRLGV---TGNIRLHPFFKTINWNLLEKRKVEPPFKP 620          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KS6AB_XENLA (Ribosomal protein S6 kinase 2 beta OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.295e-21
Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPSREENDLT 430
            +++ D+ +++ SF GT EY++PEVV   GH    DWW+ G+L +EML G+ PF+GK+RKET   +L   +  P+F+        L++ L +++   RLG  + GA E+K H FF  + W+ L    L PPF PS  + D T
Sbjct:  210 KEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHGADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSNEA--QSLLRALFKRNATNRLGSGVEGAEELKRHPFFSTIDWNKLYRRELSPPFKPSVTQPDDT 348          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KS6AA_XENLA (Ribosomal protein S6 kinase 2 alpha OS=Xenopus laevis GN=rps6ka PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.295e-21
Identity = 54/141 (38.30%), Postives = 85/141 (60.28%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLG-YLRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPSREENDLT 430
            +++ D+ +++ SF GT EY++PEVV   GH  + DWW+ G+L +EML G+ PF+GK+RKET   +L   +  P+F+        L++ L +++P  RLG  + GA EIK   FF  + W+ L    + PPF P+  + D T
Sbjct:  210 KEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSNEA--QSLLRALFKRNPTNRLGSAMEGAEEIKRQPFFSTIDWNKLFRREMSPPFKPAVTQADDT 348          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KS6A6_DANRE (Ribosomal protein S6 kinase alpha-6 OS=Danio rerio GN=rps6ka6 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.295e-21
Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPSREENDLT 430
            ++S D  +++ SF GT EY++PEVV   GH  + DWW+LG+L +EML GT PF+GK+R ET   +L   +  P+F+        L++ L +++P  RLG    G  EIK H FF  + W+ L    L+PPF P+  + D T
Sbjct:  215 KESVDQDKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSLGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSLEA--QGLLRMLFKRNPSNRLGAGPDGVEEIKRHTFFSTIDWNKLYRRELQPPFKPASGKPDDT 353          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KPCD_HUMAN (Protein kinase C delta type OS=Homo sapiens GN=PRKCD PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.295e-21
Identity = 50/122 (40.98%), Postives = 77/122 (63.11%), Query Frame = 2
Query:   47 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRTALT-DLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLLTD-VLRPPFIP 406
            R+++F GT +Y++PE+++G  + F+VDWW+ G+L YEML G +PF G +  E F ++ + TP +    T  + D++++L E++P KRLG       IK H FFK + W LL    L PPF P
Sbjct:  504 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGV---TGNIKIHPFFKTINWTLLEKRRLEPPFRP 622          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: SGK1_MACFA (Serine/threonine-protein kinase Sgk1 OS=Macaca fascicularis GN=SGK1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.692e-21
Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRW-DLLTDVLRPPFIPS 409
            +++ ++   +++F GT EY++PEV+    ++  VDWW LG + YEMLYG  PF  +N  E + N+L K  +     T +   L++ LL+KD +KRLG      EIK HVFF  + W DL+   + PPF P+
Sbjct:  245 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRMKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPN 375          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: SGK1_CHICK (Serine/threonine-protein kinase Sgk1 OS=Gallus gallus GN=SGK1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.692e-21
Identity = 50/131 (38.17%), Postives = 77/131 (58.78%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRW-DLLTDVLRPPFIPS 409
            +++ ++   +++F GT EY++PEV+    ++  VDWW LG + YEMLYG  PF  +N  E + N+L K  +     T +   L++ LL+KD  KRLG      EIK H+FF  + W DL+   + PPF P+
Sbjct:  246 KENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKEDFTEIKNHIFFSPINWDDLINKKITPPFNPN 376          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: CEK1_SCHPO (Serine/threonine-protein kinase cek1 OS=Schizosaccharomyces pombe GN=cek1 PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 1.692e-21
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 2
Query:   17 RRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIP 406
            R Q  F+N + S  F+GT +Y++PEV+ G+    A DWW+LG + +E L+G  PF  +   + F+N+L +        F  + +   DLI RLL  +P  RLG   G  EIK H FFK V WD + +   PPF+P
Sbjct:  843 RVQPFFENKDPSKRFIGTPDYIAPEVILGNPGIKASDWWSLGCVVFEFLFGYPPFNAETPDQVFQNILARRINWPAEVFTAESSVALDLIDRLLCMNPANRLG-ANGVEEIKAHPFFKSVNWDTILEE-DPPFVP 975          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: SGK1_HUMAN (Serine/threonine-protein kinase Sgk1 OS=Homo sapiens GN=SGK1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.209e-21
Identity = 51/131 (38.93%), Postives = 77/131 (58.78%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRW-DLLTDVLRPPFIPS 409
            +++ ++   +++F GT EY++PEV+    ++  VDWW LG + YEMLYG  PF  +N  E + N+L K  +     T +   L++ LL+KD  KRLG      EIK HVFF  + W DL+   + PPF P+
Sbjct:  245 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPN 375          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KS6AA_CHICK (Ribosomal protein S6 kinase 2 alpha OS=Gallus gallus GN=RPS6KA PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.209e-21
Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPSREENDLT 430
            +++ D+ +++ SF GT EY++PEVV   GH  + DWW+ G+L +EML G+ PF+GK+RKET   +L   +  P+F+        L++ L +++P  RLG    GA EIK H F+  + W+ L    ++PPF P+  + D T
Sbjct:  228 KEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSAEA--QSLLRALFKRNPANRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDT 366          
The following BLAST results are available for this feature:
BLAST of CF504059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
KPCD_RAT9.918e-2240.16Protein kinase C delta type OS=Rattus norvegicus G... [more]
KS6AB_XENLA1.295e-2139.01Ribosomal protein S6 kinase 2 beta OS=Xenopus laev... [more]
KS6AA_XENLA1.295e-2138.30Ribosomal protein S6 kinase 2 alpha OS=Xenopus lae... [more]
KS6A6_DANRE1.295e-2140.43Ribosomal protein S6 kinase alpha-6 OS=Danio rerio... [more]
KPCD_HUMAN1.295e-2140.98Protein kinase C delta type OS=Homo sapiens GN=PRK... [more]
SGK1_MACFA1.692e-2138.93Serine/threonine-protein kinase Sgk1 OS=Macaca fas... [more]
SGK1_CHICK1.692e-2138.17Serine/threonine-protein kinase Sgk1 OS=Gallus gal... [more]
CEK1_SCHPO1.692e-2139.26Serine/threonine-protein kinase cek1 OS=Schizosacc... [more]
SGK1_HUMAN2.209e-2138.93Serine/threonine-protein kinase Sgk1 OS=Homo sapie... [more]
KS6AA_CHICK2.209e-2138.30Ribosomal protein S6 kinase 2 alpha OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-547 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504059 ID=CF504059; Name=CF504059; organism=Citrus sinensis; type=EST; length=469bp
GGTCAGCCCAGTGAGTCGACGGCAACAGAGTTTCGACAACGGGGAACGGT
CCAACTCGTTTGTCGGGACCGAAGAGTACGTGTCACCTGAAGTAGTACGT
GGGGACGGACACGAGTTCGCTGTTGATTGGTGGGCTTTGGGAATCTTAAC
GTACGAGATGTTGTACGGGACGACGCCGTTTCGGGGGAAGAATAGGAAGG
AGACGTTTCGAAACGTCCTGATGAAAACGCCGGAGTTCGTTGGGCAACGT
ACGGCCTTGACGGATTTGATACAACGGCTGCTGGAGAAGGATCCCGTGAA
GAGGCTGGGATATCTACGTGGCGCGTGCGAGATCAAGGAGCACGTGTTTT
TCAAAGGCGTGAGGTGGGATCTACTAACGGATGTGTTACGGCCGCCGTTT
ATTCCGTCCAGGGAGGAGAATGATTTGACGGAGAAAGCAATGTCTGGTGG
TGGAGTGGATATAAGGGAG
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