CF504059

Overview
NameCF504059
Unique NameCF504059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: ST32B_HUMAN (Serine/threonine-protein kinase 32B OS=Homo sapiens GN=STK32B PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 42/133 (31.58%), Postives = 68/133 (51.13%), Query Frame = 2 
Query:   44 ERSNSFVGTEEYVSPEVV-----RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT----ALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPSR 412
            ER++S  GT+ Y++PEV      RG G+ + VDWW+LGI  YE+L G  P+   +       + M   E V   +     +  L+++LL KDP  R+  L    +I+   +   + WD +    L P F+P++
Sbjct:  175 ERASSMAGTKPYMAPEVFQVYMDRGPGYSYPVDWWSLGITAYELLRGWRPYEIHSVTPIDEILNMFKVERVHYSSTWCKGMVALLRKLLTKDPESRVSSLH---DIQSVPYLADMNWDAVFKKALMPGFVPNK 304
[Close]
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: AUR2_ARATH (Serine/threonine-protein kinase Aurora-2 OS=Arabidopsis thaliana GN=AUR2 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 2 
Query:   47 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRL 307
            R  +  GT +Y+ PE+V    H+ +VD W+LGIL YE LYG  PF  +   ET++ ++   +K P      ++  DLI ++L K+  +RL
Sbjct:  170 RRRTMCGTLDYLPPEMVESVEHDASVDIWSLGILCYEFLYGVPPFEAREHSETYKRIVQVDLKFPPKPIVSSSAKDLISQMLVKESTQRL 259
The following BLAST results are available for this feature:
BLAST of CF504059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
ST32B_HUMAN7.876e-1131.58Serine/threonine-protein kinase 32B OS=Homo sapien... [more]
AUR2_ARATH7.876e-1136.67Serine/threonine-protein kinase Aurora-2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-547 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504059 ID=CF504059; Name=CF504059; organism=Citrus sinensis; type=EST; length=469bp
GGTCAGCCCAGTGAGTCGACGGCAACAGAGTTTCGACAACGGGGAACGGT
CCAACTCGTTTGTCGGGACCGAAGAGTACGTGTCACCTGAAGTAGTACGT
GGGGACGGACACGAGTTCGCTGTTGATTGGTGGGCTTTGGGAATCTTAAC
GTACGAGATGTTGTACGGGACGACGCCGTTTCGGGGGAAGAATAGGAAGG
AGACGTTTCGAAACGTCCTGATGAAAACGCCGGAGTTCGTTGGGCAACGT
ACGGCCTTGACGGATTTGATACAACGGCTGCTGGAGAAGGATCCCGTGAA
GAGGCTGGGATATCTACGTGGCGCGTGCGAGATCAAGGAGCACGTGTTTT
TCAAAGGCGTGAGGTGGGATCTACTAACGGATGTGTTACGGCCGCCGTTT
ATTCCGTCCAGGGAGGAGAATGATTTGACGGAGAAAGCAATGTCTGGTGG
TGGAGTGGATATAAGGGAG
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