CF504059

Overview
NameCF504059
Unique NameCF504059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: PKN1_HUMAN (Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19
Identity = 49/128 (38.28%), Postives = 82/128 (64.06%), Query Frame = 2
Query:   41 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYL-RGACEIKEHVFFKGVRWD-LLTDVLRPPFIPS 409
            G+R+++F GT E+++PEV+    +  AVDWW LG+L YEML G +PF G + +E F +++   ++ P F+        +++RLL ++P +RLG   R A ++K+  FF+ + W+ LL   L PPF+P+
Sbjct:  769 GDRTSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSAEA--IGIMRRLLRRNPERRLGSSERDAEDVKKQPFFRTLGWEALLARRLPPPFVPT 894          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KS6B2_HUMAN (Ribosomal protein S6 kinase beta-2 OS=Homo sapiens GN=RPS6KB2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19
Identity = 51/143 (35.66%), Postives = 88/143 (61.54%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRG-ACEIKEHVFFKGVRW-DLLTDVLRPPFIPS-REENDLTE 433
            ++S   G  +++F GT EY++PE++   GH  AVDWW+LG L Y+ML G+ PF  +NRK+T   ++   +  P ++       DL+++ L+++P +R+G   G A +++ H FF+ + W DLL   + PPF P  + E D+++
Sbjct:  217 KESIHEGAVTHTFCGTIEYMAPEILVRSGHNRAVDWWSLGALMYDMLTGSPPFTAENRKKTMDKIIRGKLALPPYL--TPDARDLVKKFLKRNPSQRIGGGPGDAADVQRHPFFRHMNWDDLLAWRVDPPFRPCLQSEEDVSQ 357          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KPC1_LYTPI (Protein kinase C OS=Lytechinus pictus GN=PKC1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 2
Query:   23 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVG--QRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWDLLTD-VLRPPFIPS 409
            ++  + G+ + +F GT +Y++PE+V    +  AVDWWA G+L YEML G  PF G++  E F++++   P +     R ++T + +  L K P KRLG    G  +I+EH FF+ + W+ L +  ++PPF+PS
Sbjct:  472 KEHMNEGDTTRTFCGTPDYIAPEIVAYQPYGKAVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHVPSYPKSMSRESVT-MCKGFLTKHPGKRLGSGPTGEQDIREHQFFRRIDWEKLANREIQPPFVPS 603          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KDC2_DROME (Protein kinase DC2 OS=Drosophila melanogaster GN=Pka-C3 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19
Identity = 49/124 (39.52%), Postives = 75/124 (60.48%), Query Frame = 2
Query:   44 ERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRTALT-DLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPPFIP 406
            +R+ +  GT EY++PE+++  GH  AVDWWALG+L YEML G  PF  +     +  +L    E+      +  DLI++LL  D  KRLG ++ GA ++K H +FK + W D+ +  L+PP +P
Sbjct:  424 DRTWTLCGTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFYDEQPFGIYEKILSGKIEWERHMDPIAKDLIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPPILP 547          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: PKN3_HUMAN (Serine/threonine-protein kinase N3 OS=Homo sapiens GN=PKN3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.068e-19
Identity = 51/126 (40.48%), Postives = 76/126 (60.32%), Query Frame = 2
Query:   41 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRTAL-TDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPS 409
            G+R+++F GT E+++PEV+  + +  AVDWW LG+L YEML G  PF G   +E F  ++     + G  +    + IQ+LL+K P KRLG   + A EIK   FF+   W  LL   ++PPF+P+
Sbjct:  713 GDRTSTFCGTPEFLAPEVLTQEAYTRAVDWWGLGVLLYEMLVGECPFPGDTEEEVFDCIVNMDAPYPGFLSVQGLEFIQKLLQKCPEKRLGAGEQDAEEIKVQPFFRTTNWQALLARTIQPPFVPT 838          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KS6A4_MOUSE (Ribosomal protein S6 kinase alpha-4 OS=Mus musculus GN=Rps6ka4 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.068e-19
Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = 2
Query:   44 ERSNSFVGTEEYVSPEVVRGD-GHEFAVDWWALGILTYEMLYGTTPF----RGKNRKETFRNVLMKTPEF-VGQRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVR-WDLLTDVLRPPFIPS-REENDL 427
            ER+ SF GT EY++PE++R   GH  AVDWW+LGIL +E+L G +PF        + E  R +L  +P F +       DL+QRLL KDP KRLG   +GA E+K H FF+G+  W L    +  PF P  R E D+
Sbjct:  192 ERTFSFCGTIEYMAPEIIRSKAGHGKAVDWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPLRIGPVAQDLLQRLLCKDPKKRLGAGPQGAQEVKSHPFFQGLDWWALAARKIPAPFRPQIRSELDV 328          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KS6A4_HUMAN (Ribosomal protein S6 kinase alpha-4 OS=Homo sapiens GN=RPS6KA4 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.701e-19
Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = 2
Query:   44 ERSNSFVGTEEYVSPEVVRGD-GHEFAVDWWALGILTYEMLYGTTPF----RGKNRKETFRNVLMKTPEFVGQ-RTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWDLLTDVLRP-PFIPS-REENDL 427
            ER+ SF GT EY++PE++R   GH  AVDWW+LGIL +E+L G +PF        + E  R +L  +P F  +      DL+QRLL KDP KRLG   +GA E++ H FF+G+ W  L     P PF P  R E D+
Sbjct:  192 ERTFSFCGTIEYMAPEIIRSKTGHGKAVDWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPPRIGPVAQDLLQRLLCKDPKKRLGAGPQGAQEVRNHPFFQGLDWVALAARKIPAPFRPQIRSELDV 328          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KGP1_RABIT (cGMP-dependent protein kinase 1 OS=Oryctolagus cuniculus GN=PRKG1 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 2.701e-19
Identity = 49/130 (37.69%), Postives = 83/130 (63.85%), Query Frame = 2
Query:   41 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRWD-LLTDVLRPPFIPS 409
            G+++ +F GT EYV+PE++   GH+ + D+W+LGIL YE+L G+ PF G +  +T+  +L     ++ P+ + +  A  +LI++L   +P +RLG L+ G  +I++H +F+G  W+ L    L PP IPS
Sbjct:  512 GKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEFPKKIAKNAA--NLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKGTLTPPIIPS 639          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KGP1_MOUSE (cGMP-dependent protein kinase 1 OS=Mus musculus GN=Prkg1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.701e-19
Identity = 49/130 (37.69%), Postives = 83/130 (63.85%), Query Frame = 2
Query:   41 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRWD-LLTDVLRPPFIPS 409
            G+++ +F GT EYV+PE++   GH+ + D+W+LGIL YE+L G+ PF G +  +T+  +L     ++ P+ + +  A  +LI++L   +P +RLG L+ G  +I++H +F+G  W+ L    L PP IPS
Sbjct:  512 GKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEFPKKIAKNAA--NLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKGTLTPPIIPS 639          
BLAST of CF504059 vs. ExPASy Swiss-Prot
Match: KGP1_HUMAN (cGMP-dependent protein kinase 1 OS=Homo sapiens GN=PRKG1 PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 2.701e-19
Identity = 49/130 (37.69%), Postives = 83/130 (63.85%), Query Frame = 2
Query:   41 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRWD-LLTDVLRPPFIPS 409
            G+++ +F GT EYV+PE++   GH+ + D+W+LGIL YE+L G+ PF G +  +T+  +L     ++ P+ + +  A  +LI++L   +P +RLG L+ G  +I++H +F+G  W+ L    L PP IPS
Sbjct:  512 GKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRGIDMIEFPKKIAKNAA--NLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKGTLTPPIIPS 639          
The following BLAST results are available for this feature:
BLAST of CF504059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
PKN1_HUMAN1.583e-1938.28Serine/threonine-protein kinase N1 OS=Homo sapiens... [more]
KS6B2_HUMAN1.583e-1935.66Ribosomal protein S6 kinase beta-2 OS=Homo sapiens... [more]
KPC1_LYTPI1.583e-1936.84Protein kinase C OS=Lytechinus pictus GN=PKC1 PE=2... [more]
KDC2_DROME1.583e-1939.52Protein kinase DC2 OS=Drosophila melanogaster GN=P... [more]
PKN3_HUMAN2.068e-1940.48Serine/threonine-protein kinase N3 OS=Homo sapiens... [more]
KS6A4_MOUSE2.068e-1944.53Ribosomal protein S6 kinase alpha-4 OS=Mus musculu... [more]
KS6A4_HUMAN2.701e-1944.53Ribosomal protein S6 kinase alpha-4 OS=Homo sapien... [more]
KGP1_RABIT2.701e-1937.69cGMP-dependent protein kinase 1 OS=Oryctolagus cun... [more]
KGP1_MOUSE2.701e-1937.69cGMP-dependent protein kinase 1 OS=Mus musculus GN... [more]
KGP1_HUMAN2.701e-1937.69cGMP-dependent protein kinase 1 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-547 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504059 ID=CF504059; Name=CF504059; organism=Citrus sinensis; type=EST; length=469bp
GGTCAGCCCAGTGAGTCGACGGCAACAGAGTTTCGACAACGGGGAACGGT
CCAACTCGTTTGTCGGGACCGAAGAGTACGTGTCACCTGAAGTAGTACGT
GGGGACGGACACGAGTTCGCTGTTGATTGGTGGGCTTTGGGAATCTTAAC
GTACGAGATGTTGTACGGGACGACGCCGTTTCGGGGGAAGAATAGGAAGG
AGACGTTTCGAAACGTCCTGATGAAAACGCCGGAGTTCGTTGGGCAACGT
ACGGCCTTGACGGATTTGATACAACGGCTGCTGGAGAAGGATCCCGTGAA
GAGGCTGGGATATCTACGTGGCGCGTGCGAGATCAAGGAGCACGTGTTTT
TCAAAGGCGTGAGGTGGGATCTACTAACGGATGTGTTACGGCCGCCGTTT
ATTCCGTCCAGGGAGGAGAATGATTTGACGGAGAAAGCAATGTCTGGTGG
TGGAGTGGATATAAGGGAG
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