CF504061
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 103 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDRPP 360 SQ +FVG LS +K AF+ FG I++A+V+ + +GKS+G+GFV++ + A +A M GQ L GR IR ++A +PP Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP 187
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 103 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDRPP 360 SQ +FVG LS +K AF+ FG I++A+V+ + +GKS+G+GFV++ + A +A M GQ L GR IR ++A +PP Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP 187
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: RBM24_DANRE (RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11 Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 115 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSA----QSAMDGQELN 318 TK+FVGGL + T DSSL++ F FG+I EA VIT+R++GKSRG+GFVT +A A +DG++ N Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKDPNPIIDGRKAN 82
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: NUCL_PONAB (Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 37 GMLVRQNGQAPKASLINAVRFMSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 354 G +R Q P+ S NA SQ LFV GLS T + +LKE+F A+++T+RE+G S+GFGFV ++S E A +A+ AM+ E++G + + +A + Sbjct: 552 GRAIRLELQGPRGSP-NA---RSQPSKTLFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 650
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: NUCL_MACFA (Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 37 GMLVRQNGQAPKASLINAVRFMSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 354 G +R Q P+ S NA SQ LFV GLS T + +LKE+F A+++T+RE+G S+GFGFV ++S E A +A+ AM+ E++G + + +A + Sbjct: 551 GRAIRLELQGPRGSP-NA---RSQPSKTLFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 649
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: NUCL_HUMAN (Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 37 GMLVRQNGQAPKASLINAVRFMSQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDR 354 G +R Q P+ S NA SQ LFV GLS T + +LKE+F A+++T+RE+G S+GFGFV ++S E A +A+ AM+ E++G + + +A + Sbjct: 550 GRAIRLELQGPRGSP-NA---RSQPSKTLFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 103 SQSQTKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFANDRP 357 ++ +FVG LSW DD LK+ F + G + A+VI ER + +SRG+G+V +++ A A M G+E++GR I + +P Sbjct: 164 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKP 248
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: RBM38_XENLA (RNA-binding protein 38 OS=Xenopus laevis GN=rbm38 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 115 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSA----QSAMDGQELN 318 TK+FVGGL + T D+SL++ F FGDI EA VIT+R++ KSRG+GFVT +A A +DG++ N Sbjct: 11 TKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTAKSRGYGFVTMSDRAAAERACKDPNPIIDGRKAN 82
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: RBM24_HUMAN (RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 115 TKLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSA----QSAMDGQELN 318 TK+FVGGL + T D+SL++ F FG+I EA VIT+R++GKSRG+GFVT +A A +DG++ N Sbjct: 11 TKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKAN 82
BLAST of CF504061 vs. ExPASy Swiss-Prot
Match: HNRPG_PANTR (Heterogeneous nuclear ribonucleoprotein G OS=Pan troglodytes GN=RBMX PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 118 KLFVGGLSWGTDDSSLKEAFSNFGDITEAKVITERESGKSRGFGFVTYDSNESASSAQSAMDGQELNGRNIRVSFA 345 KLF+GGL+ T++ +L+ F +G I E ++ +RE+ KSRGF FVT++S A A M+G+ L+G+ I+V A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84 The following BLAST results are available for this feature:
BLAST of CF504061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504061 ID=CF504061; Name=CF504061; organism=Citrus sinensis; type=EST; length=493bpback to top |